Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Col25a1Q99MQ5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.47■□□□□ 0.87
Col25a1Q99MQ5 Gm7290-201ENSMUST00000104990 617 ntBASIC20.47■□□□□ 0.87
Col25a1Q99MQ5 Gm12918-201ENSMUST00000120234 636 ntBASIC20.47■□□□□ 0.87
Col25a1Q99MQ5 Gm15710-201ENSMUST00000121821 636 ntBASIC20.47■□□□□ 0.87
Col25a1Q99MQ5 Gm5075-201ENSMUST00000196916 622 ntBASIC20.47■□□□□ 0.87
Col25a1Q99MQ5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.47■□□□□ 0.87
Col25a1Q99MQ5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.47■□□□□ 0.87
Col25a1Q99MQ5 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col25a1Q99MQ5 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col25a1Q99MQ5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col25a1Q99MQ5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col25a1Q99MQ5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col25a1Q99MQ5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.46■□□□□ 0.87
Col25a1Q99MQ5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.46■□□□□ 0.87
Col25a1Q99MQ5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col25a1Q99MQ5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col25a1Q99MQ5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Col25a1Q99MQ5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col25a1Q99MQ5 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col25a1Q99MQ5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Col25a1Q99MQ5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col25a1Q99MQ5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Col25a1Q99MQ5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Col25a1Q99MQ5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Col25a1Q99MQ5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col25a1Q99MQ5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.44■□□□□ 0.86
Col25a1Q99MQ5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.44■□□□□ 0.86
Col25a1Q99MQ5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col25a1Q99MQ5 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Col25a1Q99MQ5 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.44■□□□□ 0.86
Col25a1Q99MQ5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col25a1Q99MQ5 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.44■□□□□ 0.86
Col25a1Q99MQ5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Col25a1Q99MQ5 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Col25a1Q99MQ5 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Col25a1Q99MQ5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col25a1Q99MQ5 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col25a1Q99MQ5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.43■□□□□ 0.86
Col25a1Q99MQ5 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col25a1Q99MQ5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col25a1Q99MQ5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col25a1Q99MQ5 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.43■□□□□ 0.86
Col25a1Q99MQ5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col25a1Q99MQ5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col25a1Q99MQ5 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col25a1Q99MQ5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Col25a1Q99MQ5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.42■□□□□ 0.86
Col25a1Q99MQ5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col25a1Q99MQ5 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.42■□□□□ 0.86
Col25a1Q99MQ5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.42■□□□□ 0.86
Col25a1Q99MQ5 Gm6365-201ENSMUST00000054711 744 ntBASIC20.42■□□□□ 0.86
Col25a1Q99MQ5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Col25a1Q99MQ5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Col25a1Q99MQ5 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col25a1Q99MQ5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col25a1Q99MQ5 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col25a1Q99MQ5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col25a1Q99MQ5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col25a1Q99MQ5 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col25a1Q99MQ5 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.41■□□□□ 0.86
Col25a1Q99MQ5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col25a1Q99MQ5 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.41■□□□□ 0.86
Col25a1Q99MQ5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col25a1Q99MQ5 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.41■□□□□ 0.86
Col25a1Q99MQ5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col25a1Q99MQ5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col25a1Q99MQ5 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.4■□□□□ 0.86
Col25a1Q99MQ5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col25a1Q99MQ5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.4■□□□□ 0.86
Col25a1Q99MQ5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Col25a1Q99MQ5 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col25a1Q99MQ5 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.4■□□□□ 0.86
Col25a1Q99MQ5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.4■□□□□ 0.86
Col25a1Q99MQ5 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.4■□□□□ 0.86
Col25a1Q99MQ5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col25a1Q99MQ5 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.4■□□□□ 0.86
Col25a1Q99MQ5 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col25a1Q99MQ5 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col25a1Q99MQ5 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col25a1Q99MQ5 Gm7367-201ENSMUST00000057611 492 ntBASIC20.4■□□□□ 0.86
Col25a1Q99MQ5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Col25a1Q99MQ5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col25a1Q99MQ5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Col25a1Q99MQ5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Col25a1Q99MQ5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Col25a1Q99MQ5 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.39■□□□□ 0.85
Col25a1Q99MQ5 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Col25a1Q99MQ5 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col25a1Q99MQ5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Col25a1Q99MQ5 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Col25a1Q99MQ5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col25a1Q99MQ5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col25a1Q99MQ5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col25a1Q99MQ5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Col25a1Q99MQ5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col25a1Q99MQ5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Col25a1Q99MQ5 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col25a1Q99MQ5 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col25a1Q99MQ5 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms