Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf111Q99ML9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
Rnf111Q99ML9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19■□□□□ 0.63
Rnf111Q99ML9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf111Q99ML9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf111Q99ML9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf111Q99ML9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rnf111Q99ML9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19■□□□□ 0.63
Rnf111Q99ML9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19■□□□□ 0.63
Rnf111Q99ML9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf111Q99ML9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf111Q99ML9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rnf111Q99ML9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rnf111Q99ML9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rnf111Q99ML9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rnf111Q99ML9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf111Q99ML9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf111Q99ML9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.99■□□□□ 0.63
Rnf111Q99ML9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf111Q99ML9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf111Q99ML9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf111Q99ML9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf111Q99ML9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rnf111Q99ML9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf111Q99ML9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Rnf111Q99ML9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf111Q99ML9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf111Q99ML9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf111Q99ML9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.98■□□□□ 0.63
Rnf111Q99ML9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.98■□□□□ 0.63
Rnf111Q99ML9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf111Q99ML9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rnf111Q99ML9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf111Q99ML9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf111Q99ML9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Rnf111Q99ML9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf111Q99ML9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf111Q99ML9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Rnf111Q99ML9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.97■□□□□ 0.63
Rnf111Q99ML9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf111Q99ML9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf111Q99ML9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf111Q99ML9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf111Q99ML9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf111Q99ML9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rnf111Q99ML9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf111Q99ML9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf111Q99ML9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf111Q99ML9 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.96■□□□□ 0.63
Rnf111Q99ML9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf111Q99ML9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.96■□□□□ 0.63
Rnf111Q99ML9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Rnf111Q99ML9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.96■□□□□ 0.63
Rnf111Q99ML9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf111Q99ML9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf111Q99ML9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf111Q99ML9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rnf111Q99ML9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf111Q99ML9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf111Q99ML9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf111Q99ML9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf111Q99ML9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf111Q99ML9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf111Q99ML9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf111Q99ML9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Rnf111Q99ML9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf111Q99ML9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Rnf111Q99ML9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.95■□□□□ 0.62
Rnf111Q99ML9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.95■□□□□ 0.62
Rnf111Q99ML9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf111Q99ML9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf111Q99ML9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Rnf111Q99ML9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf111Q99ML9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rnf111Q99ML9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf111Q99ML9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf111Q99ML9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf111Q99ML9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf111Q99ML9 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.94■□□□□ 0.62
Rnf111Q99ML9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rnf111Q99ML9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf111Q99ML9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Rnf111Q99ML9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf111Q99ML9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf111Q99ML9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf111Q99ML9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf111Q99ML9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rnf111Q99ML9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf111Q99ML9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.93■□□□□ 0.62
Rnf111Q99ML9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf111Q99ML9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf111Q99ML9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf111Q99ML9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf111Q99ML9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.93■□□□□ 0.62
Rnf111Q99ML9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf111Q99ML9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf111Q99ML9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Rnf111Q99ML9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf111Q99ML9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rnf111Q99ML9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms