Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx6-1Q99MA9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.45■□□□□ 0.54
Nkx6-1Q99MA9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Nkx6-1Q99MA9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx6-1Q99MA9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Nkx6-1Q99MA9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx6-1Q99MA9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx6-1Q99MA9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx6-1Q99MA9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Gm7290-201ENSMUST00000104990 617 ntBASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Gm12918-201ENSMUST00000120234 636 ntBASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Gm15710-201ENSMUST00000121821 636 ntBASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Gm5075-201ENSMUST00000196916 622 ntBASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Nkx6-1Q99MA9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Nkx6-1Q99MA9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.43■□□□□ 0.54
Nkx6-1Q99MA9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx6-1Q99MA9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.43■□□□□ 0.54
Nkx6-1Q99MA9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.43■□□□□ 0.54
Nkx6-1Q99MA9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.43■□□□□ 0.54
Nkx6-1Q99MA9 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.43■□□□□ 0.54
Nkx6-1Q99MA9 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.43■□□□□ 0.54
Nkx6-1Q99MA9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx6-1Q99MA9 Gm10812-201ENSMUST00000099864 546 ntBASIC18.43■□□□□ 0.54
Nkx6-1Q99MA9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx6-1Q99MA9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx6-1Q99MA9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx6-1Q99MA9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx6-1Q99MA9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx6-1Q99MA9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx6-1Q99MA9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Nkx6-1Q99MA9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.42■□□□□ 0.54
Nkx6-1Q99MA9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx6-1Q99MA9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nkx6-1Q99MA9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.42■□□□□ 0.54
Nkx6-1Q99MA9 Gm20049-201ENSMUST00000219950 730 ntBASIC18.42■□□□□ 0.54
Nkx6-1Q99MA9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx6-1Q99MA9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx6-1Q99MA9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx6-1Q99MA9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx6-1Q99MA9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.41■□□□□ 0.54
Nkx6-1Q99MA9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx6-1Q99MA9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.41■□□□□ 0.54
Nkx6-1Q99MA9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx6-1Q99MA9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Nkx6-1Q99MA9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Nkx6-1Q99MA9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx6-1Q99MA9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx6-1Q99MA9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx6-1Q99MA9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx6-1Q99MA9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx6-1Q99MA9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx6-1Q99MA9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Nkx6-1Q99MA9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Nkx6-1Q99MA9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx6-1Q99MA9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx6-1Q99MA9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx6-1Q99MA9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx6-1Q99MA9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.4■□□□□ 0.54
Nkx6-1Q99MA9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
Nkx6-1Q99MA9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx6-1Q99MA9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Nkx6-1Q99MA9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Nkx6-1Q99MA9 Gm6420-201ENSMUST00000193885 723 ntBASIC18.39■□□□□ 0.53
Nkx6-1Q99MA9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx6-1Q99MA9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx6-1Q99MA9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx6-1Q99MA9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx6-1Q99MA9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nkx6-1Q99MA9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx6-1Q99MA9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx6-1Q99MA9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.38■□□□□ 0.53
Nkx6-1Q99MA9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nkx6-1Q99MA9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx6-1Q99MA9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx6-1Q99MA9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx6-1Q99MA9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx6-1Q99MA9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nkx6-1Q99MA9 Gm13146-201ENSMUST00000118508 780 ntBASIC18.37■□□□□ 0.53
Nkx6-1Q99MA9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms