Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Lysmd3Q99LE3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Lysmd3Q99LE3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd3Q99LE3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd3Q99LE3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.41■□□□□ 0.86
Lysmd3Q99LE3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lysmd3Q99LE3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Lysmd3Q99LE3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lysmd3Q99LE3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lysmd3Q99LE3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lysmd3Q99LE3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lysmd3Q99LE3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lysmd3Q99LE3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Lysmd3Q99LE3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.4■□□□□ 0.86
Lysmd3Q99LE3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lysmd3Q99LE3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lysmd3Q99LE3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lysmd3Q99LE3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lysmd3Q99LE3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lysmd3Q99LE3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Lysmd3Q99LE3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Lysmd3Q99LE3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lysmd3Q99LE3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lysmd3Q99LE3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.39■□□□□ 0.85
Lysmd3Q99LE3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lysmd3Q99LE3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lysmd3Q99LE3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lysmd3Q99LE3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Lysmd3Q99LE3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lysmd3Q99LE3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lysmd3Q99LE3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lysmd3Q99LE3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lysmd3Q99LE3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lysmd3Q99LE3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lysmd3Q99LE3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.38■□□□□ 0.85
Lysmd3Q99LE3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lysmd3Q99LE3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lysmd3Q99LE3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lysmd3Q99LE3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lysmd3Q99LE3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lysmd3Q99LE3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.37■□□□□ 0.85
Lysmd3Q99LE3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.37■□□□□ 0.85
Lysmd3Q99LE3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lysmd3Q99LE3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.37■□□□□ 0.85
Lysmd3Q99LE3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Lysmd3Q99LE3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lysmd3Q99LE3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lysmd3Q99LE3 Gm5874-201ENSMUST00000096101 508 ntBASIC20.37■□□□□ 0.85
Lysmd3Q99LE3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lysmd3Q99LE3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd3Q99LE3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd3Q99LE3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Lysmd3Q99LE3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd3Q99LE3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd3Q99LE3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd3Q99LE3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd3Q99LE3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lysmd3Q99LE3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Lysmd3Q99LE3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.35■□□□□ 0.85
Lysmd3Q99LE3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lysmd3Q99LE3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.35■□□□□ 0.85
Lysmd3Q99LE3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Lysmd3Q99LE3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lysmd3Q99LE3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.35■□□□□ 0.85
Lysmd3Q99LE3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lysmd3Q99LE3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Lysmd3Q99LE3 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.35■□□□□ 0.85
Lysmd3Q99LE3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lysmd3Q99LE3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lysmd3Q99LE3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Lysmd3Q99LE3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lysmd3Q99LE3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lysmd3Q99LE3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lysmd3Q99LE3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Lysmd3Q99LE3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lysmd3Q99LE3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lysmd3Q99LE3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lysmd3Q99LE3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lysmd3Q99LE3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lysmd3Q99LE3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Lysmd3Q99LE3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.34■□□□□ 0.85
Lysmd3Q99LE3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lysmd3Q99LE3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lysmd3Q99LE3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lysmd3Q99LE3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lysmd3Q99LE3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lysmd3Q99LE3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.34■□□□□ 0.85
Lysmd3Q99LE3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
Lysmd3Q99LE3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lysmd3Q99LE3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lysmd3Q99LE3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Lysmd3Q99LE3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Lysmd3Q99LE3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Lysmd3Q99LE3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.33■□□□□ 0.85
Lysmd3Q99LE3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lysmd3Q99LE3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lysmd3Q99LE3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Lysmd3Q99LE3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.33■□□□□ 0.84
Lysmd3Q99LE3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lysmd3Q99LE3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms