Protein–RNA interactions for Protein: Q99J19

Smim11a, Small integral membrane protein 11A, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim11aQ99J19 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Smim11aQ99J19 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.22■□□□□ 0.67
Smim11aQ99J19 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smim11aQ99J19 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.22■□□□□ 0.67
Smim11aQ99J19 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smim11aQ99J19 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Smim11aQ99J19 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smim11aQ99J19 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smim11aQ99J19 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
Smim11aQ99J19 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.21■□□□□ 0.67
Smim11aQ99J19 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.21■□□□□ 0.67
Smim11aQ99J19 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smim11aQ99J19 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smim11aQ99J19 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smim11aQ99J19 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Smim11aQ99J19 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smim11aQ99J19 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smim11aQ99J19 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smim11aQ99J19 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.2■□□□□ 0.66
Smim11aQ99J19 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smim11aQ99J19 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smim11aQ99J19 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smim11aQ99J19 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smim11aQ99J19 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smim11aQ99J19 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Smim11aQ99J19 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Smim11aQ99J19 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Smim11aQ99J19 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smim11aQ99J19 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.19■□□□□ 0.66
Smim11aQ99J19 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.19■□□□□ 0.66
Smim11aQ99J19 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.19■□□□□ 0.66
Smim11aQ99J19 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smim11aQ99J19 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smim11aQ99J19 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Smim11aQ99J19 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smim11aQ99J19 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smim11aQ99J19 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smim11aQ99J19 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Smim11aQ99J19 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smim11aQ99J19 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smim11aQ99J19 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smim11aQ99J19 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.18■□□□□ 0.66
Smim11aQ99J19 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Smim11aQ99J19 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.18■□□□□ 0.66
Smim11aQ99J19 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Smim11aQ99J19 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smim11aQ99J19 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.18■□□□□ 0.66
Smim11aQ99J19 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Smim11aQ99J19 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Smim11aQ99J19 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smim11aQ99J19 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smim11aQ99J19 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smim11aQ99J19 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.17■□□□□ 0.66
Smim11aQ99J19 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smim11aQ99J19 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smim11aQ99J19 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smim11aQ99J19 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smim11aQ99J19 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smim11aQ99J19 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smim11aQ99J19 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smim11aQ99J19 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.16■□□□□ 0.66
Smim11aQ99J19 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Smim11aQ99J19 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smim11aQ99J19 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smim11aQ99J19 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smim11aQ99J19 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smim11aQ99J19 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smim11aQ99J19 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smim11aQ99J19 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Smim11aQ99J19 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.15■□□□□ 0.66
Smim11aQ99J19 Etf1-202ENSMUST00000180351 108 ntBASIC19.15■□□□□ 0.66
Smim11aQ99J19 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Smim11aQ99J19 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Smim11aQ99J19 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smim11aQ99J19 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smim11aQ99J19 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smim11aQ99J19 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smim11aQ99J19 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smim11aQ99J19 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smim11aQ99J19 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smim11aQ99J19 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smim11aQ99J19 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Smim11aQ99J19 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Smim11aQ99J19 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smim11aQ99J19 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Smim11aQ99J19 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smim11aQ99J19 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smim11aQ99J19 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.14■□□□□ 0.65
Smim11aQ99J19 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.14■□□□□ 0.65
Smim11aQ99J19 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.14■□□□□ 0.65
Smim11aQ99J19 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smim11aQ99J19 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smim11aQ99J19 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smim11aQ99J19 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
Smim11aQ99J19 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smim11aQ99J19 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smim11aQ99J19 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smim11aQ99J19 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smim11aQ99J19 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.13■□□□□ 0.65
Smim11aQ99J19 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms