Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp1aQ921W0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Chmp1aQ921W0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp1aQ921W0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp1aQ921W0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp1aQ921W0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp1aQ921W0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp1aQ921W0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp1aQ921W0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp1aQ921W0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp1aQ921W0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp1aQ921W0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.28■□□□□ 0.36
Chmp1aQ921W0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp1aQ921W0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Chmp1aQ921W0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp1aQ921W0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp1aQ921W0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp1aQ921W0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp1aQ921W0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp1aQ921W0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp1aQ921W0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp1aQ921W0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp1aQ921W0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp1aQ921W0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp1aQ921W0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Chmp1aQ921W0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp1aQ921W0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp1aQ921W0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp1aQ921W0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp1aQ921W0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp1aQ921W0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp1aQ921W0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp1aQ921W0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp1aQ921W0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp1aQ921W0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp1aQ921W0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp1aQ921W0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp1aQ921W0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp1aQ921W0 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.26■□□□□ 0.35
Chmp1aQ921W0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.26■□□□□ 0.35
Chmp1aQ921W0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp1aQ921W0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp1aQ921W0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp1aQ921W0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp1aQ921W0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp1aQ921W0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp1aQ921W0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp1aQ921W0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp1aQ921W0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Chmp1aQ921W0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Chmp1aQ921W0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp1aQ921W0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp1aQ921W0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chmp1aQ921W0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp1aQ921W0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp1aQ921W0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp1aQ921W0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp1aQ921W0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp1aQ921W0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp1aQ921W0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp1aQ921W0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp1aQ921W0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp1aQ921W0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.24■□□□□ 0.35
Chmp1aQ921W0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp1aQ921W0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp1aQ921W0 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.24■□□□□ 0.35
Chmp1aQ921W0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chmp1aQ921W0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp1aQ921W0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp1aQ921W0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Chmp1aQ921W0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Chmp1aQ921W0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp1aQ921W0 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.23■□□□□ 0.35
Chmp1aQ921W0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp1aQ921W0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp1aQ921W0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp1aQ921W0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp1aQ921W0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
Chmp1aQ921W0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Chmp1aQ921W0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp1aQ921W0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp1aQ921W0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp1aQ921W0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp1aQ921W0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp1aQ921W0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp1aQ921W0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp1aQ921W0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp1aQ921W0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Chmp1aQ921W0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp1aQ921W0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp1aQ921W0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp1aQ921W0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp1aQ921W0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Chmp1aQ921W0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp1aQ921W0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp1aQ921W0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp1aQ921W0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp1aQ921W0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp1aQ921W0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp1aQ921W0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms