Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc3Q91XX1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc3Q91XX1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc3Q91XX1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc3Q91XX1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc3Q91XX1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc3Q91XX1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc3Q91XX1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc3Q91XX1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc3Q91XX1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc3Q91XX1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhgc3Q91XX1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgc3Q91XX1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgc3Q91XX1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Pcdhgc3Q91XX1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgc3Q91XX1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgc3Q91XX1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgc3Q91XX1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgc3Q91XX1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgc3Q91XX1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgc3Q91XX1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhgc3Q91XX1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc3Q91XX1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc3Q91XX1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc3Q91XX1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc3Q91XX1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc3Q91XX1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhgc3Q91XX1 Gm5921-201ENSMUST00000075898 882 ntBASIC18.46■□□□□ 0.55
Pcdhgc3Q91XX1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc3Q91XX1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhgc3Q91XX1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdhgc3Q91XX1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhgc3Q91XX1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgc3Q91XX1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgc3Q91XX1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgc3Q91XX1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgc3Q91XX1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgc3Q91XX1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.45■□□□□ 0.54
Pcdhgc3Q91XX1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgc3Q91XX1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdhgc3Q91XX1 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.45■□□□□ 0.54
Pcdhgc3Q91XX1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgc3Q91XX1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgc3Q91XX1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pcdhgc3Q91XX1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgc3Q91XX1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgc3Q91XX1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgc3Q91XX1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhgc3Q91XX1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc3Q91XX1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc3Q91XX1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Pcdhgc3Q91XX1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.44■□□□□ 0.54
Pcdhgc3Q91XX1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pcdhgc3Q91XX1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc3Q91XX1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Pcdhgc3Q91XX1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc3Q91XX1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc3Q91XX1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdhgc3Q91XX1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc3Q91XX1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc3Q91XX1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc3Q91XX1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdhgc3Q91XX1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc3Q91XX1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcdhgc3Q91XX1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc3Q91XX1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc3Q91XX1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc3Q91XX1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhgc3Q91XX1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pcdhgc3Q91XX1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc3Q91XX1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdhgc3Q91XX1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc3Q91XX1 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.42■□□□□ 0.54
Pcdhgc3Q91XX1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc3Q91XX1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc3Q91XX1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdhgc3Q91XX1 Gm45444-201ENSMUST00000211394 898 ntBASIC18.42■□□□□ 0.54
Pcdhgc3Q91XX1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pcdhgc3Q91XX1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc3Q91XX1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc3Q91XX1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.42■□□□□ 0.54
Pcdhgc3Q91XX1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc3Q91XX1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc3Q91XX1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc3Q91XX1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdhgc3Q91XX1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgc3Q91XX1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Pcdhgc3Q91XX1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgc3Q91XX1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdhgc3Q91XX1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgc3Q91XX1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgc3Q91XX1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgc3Q91XX1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgc3Q91XX1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.41■□□□□ 0.54
Pcdhgc3Q91XX1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgc3Q91XX1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Pcdhgc3Q91XX1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgc3Q91XX1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhgc3Q91XX1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgc3Q91XX1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms