Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cspg4Q8VHY0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cspg4Q8VHY0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Cspg4Q8VHY0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cspg4Q8VHY0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Cspg4Q8VHY0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cspg4Q8VHY0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.02■□□□□ 0.31
Cspg4Q8VHY0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cspg4Q8VHY0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cspg4Q8VHY0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cspg4Q8VHY0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cspg4Q8VHY0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.01■□□□□ 0.31
Cspg4Q8VHY0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cspg4Q8VHY0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.01■□□□□ 0.31
Cspg4Q8VHY0 Gm6576-201ENSMUST00000169678 883 ntBASIC17.01■□□□□ 0.31
Cspg4Q8VHY0 Gm27741-201ENSMUST00000185060 237 ntBASIC17.01■□□□□ 0.31
Cspg4Q8VHY0 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.01■□□□□ 0.31
Cspg4Q8VHY0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cspg4Q8VHY0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cspg4Q8VHY0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cspg4Q8VHY0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cspg4Q8VHY0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cspg4Q8VHY0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cspg4Q8VHY0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.01■□□□□ 0.31
Cspg4Q8VHY0 Gm15565-201ENSMUST00000118890 427 ntBASIC17.01■□□□□ 0.31
Cspg4Q8VHY0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.01■□□□□ 0.31
Cspg4Q8VHY0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.01■□□□□ 0.31
Cspg4Q8VHY0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cspg4Q8VHY0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cspg4Q8VHY0 Gm10571-201ENSMUST00000097869 1638 ntBASIC17■□□□□ 0.31
Cspg4Q8VHY0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cspg4Q8VHY0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cspg4Q8VHY0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cspg4Q8VHY0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cspg4Q8VHY0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Cspg4Q8VHY0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cspg4Q8VHY0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.99■□□□□ 0.31
Cspg4Q8VHY0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.99■□□□□ 0.31
Cspg4Q8VHY0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cspg4Q8VHY0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cspg4Q8VHY0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cspg4Q8VHY0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cspg4Q8VHY0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cspg4Q8VHY0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cspg4Q8VHY0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cspg4Q8VHY0 Gm13146-201ENSMUST00000118508 780 ntBASIC16.98■□□□□ 0.31
Cspg4Q8VHY0 Gm21362-201ENSMUST00000194272 928 ntBASIC16.98■□□□□ 0.31
Cspg4Q8VHY0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg4Q8VHY0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg4Q8VHY0 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.98■□□□□ 0.31
Cspg4Q8VHY0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg4Q8VHY0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg4Q8VHY0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cspg4Q8VHY0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cspg4Q8VHY0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cspg4Q8VHY0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cspg4Q8VHY0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.97■□□□□ 0.31
Cspg4Q8VHY0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cspg4Q8VHY0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cspg4Q8VHY0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cspg4Q8VHY0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cspg4Q8VHY0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cspg4Q8VHY0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Cspg4Q8VHY0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cspg4Q8VHY0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cspg4Q8VHY0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.97■□□□□ 0.31
Cspg4Q8VHY0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cspg4Q8VHY0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cspg4Q8VHY0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cspg4Q8VHY0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.96■□□□□ 0.31
Cspg4Q8VHY0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.96■□□□□ 0.31
Cspg4Q8VHY0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.96■□□□□ 0.31
Cspg4Q8VHY0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cspg4Q8VHY0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cspg4Q8VHY0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cspg4Q8VHY0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.96■□□□□ 0.3
Cspg4Q8VHY0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Cspg4Q8VHY0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cspg4Q8VHY0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cspg4Q8VHY0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.96■□□□□ 0.3
Cspg4Q8VHY0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cspg4Q8VHY0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cspg4Q8VHY0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cspg4Q8VHY0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cspg4Q8VHY0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cspg4Q8VHY0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Cspg4Q8VHY0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cspg4Q8VHY0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cspg4Q8VHY0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Cspg4Q8VHY0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cspg4Q8VHY0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cspg4Q8VHY0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cspg4Q8VHY0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cspg4Q8VHY0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cspg4Q8VHY0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.95■□□□□ 0.3
Cspg4Q8VHY0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cspg4Q8VHY0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
Cspg4Q8VHY0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cspg4Q8VHY0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cspg4Q8VHY0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms