Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rab40bQ8VHP8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab40bQ8VHP8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.64■□□□□ 0.41
Rab40bQ8VHP8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rab40bQ8VHP8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.64■□□□□ 0.41
Rab40bQ8VHP8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab40bQ8VHP8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab40bQ8VHP8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rab40bQ8VHP8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.64■□□□□ 0.41
Rab40bQ8VHP8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab40bQ8VHP8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab40bQ8VHP8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab40bQ8VHP8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.63■□□□□ 0.41
Rab40bQ8VHP8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rab40bQ8VHP8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.63■□□□□ 0.41
Rab40bQ8VHP8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab40bQ8VHP8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rab40bQ8VHP8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab40bQ8VHP8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab40bQ8VHP8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab40bQ8VHP8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab40bQ8VHP8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab40bQ8VHP8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Rab40bQ8VHP8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rab40bQ8VHP8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab40bQ8VHP8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rab40bQ8VHP8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.62■□□□□ 0.41
Rab40bQ8VHP8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab40bQ8VHP8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab40bQ8VHP8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab40bQ8VHP8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab40bQ8VHP8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Rab40bQ8VHP8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab40bQ8VHP8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab40bQ8VHP8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab40bQ8VHP8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab40bQ8VHP8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab40bQ8VHP8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rab40bQ8VHP8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab40bQ8VHP8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab40bQ8VHP8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab40bQ8VHP8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.61■□□□□ 0.41
Rab40bQ8VHP8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Rab40bQ8VHP8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Rab40bQ8VHP8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab40bQ8VHP8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rab40bQ8VHP8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab40bQ8VHP8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab40bQ8VHP8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab40bQ8VHP8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rab40bQ8VHP8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab40bQ8VHP8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab40bQ8VHP8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab40bQ8VHP8 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.6■□□□□ 0.41
Rab40bQ8VHP8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab40bQ8VHP8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab40bQ8VHP8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Rab40bQ8VHP8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Rab40bQ8VHP8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab40bQ8VHP8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab40bQ8VHP8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab40bQ8VHP8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab40bQ8VHP8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rab40bQ8VHP8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab40bQ8VHP8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab40bQ8VHP8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab40bQ8VHP8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rab40bQ8VHP8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab40bQ8VHP8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab40bQ8VHP8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab40bQ8VHP8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rab40bQ8VHP8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.59■□□□□ 0.41
Rab40bQ8VHP8 Gm43566-201ENSMUST00000196851 808 ntBASIC17.59■□□□□ 0.41
Rab40bQ8VHP8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.59■□□□□ 0.41
Rab40bQ8VHP8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab40bQ8VHP8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab40bQ8VHP8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab40bQ8VHP8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rab40bQ8VHP8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab40bQ8VHP8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rab40bQ8VHP8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rab40bQ8VHP8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rab40bQ8VHP8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.58■□□□□ 0.41
Rab40bQ8VHP8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab40bQ8VHP8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rab40bQ8VHP8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rab40bQ8VHP8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab40bQ8VHP8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab40bQ8VHP8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab40bQ8VHP8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab40bQ8VHP8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab40bQ8VHP8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab40bQ8VHP8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab40bQ8VHP8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab40bQ8VHP8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab40bQ8VHP8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Rab40bQ8VHP8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.57■□□□□ 0.4
Rab40bQ8VHP8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.57■□□□□ 0.4
Rab40bQ8VHP8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.57■□□□□ 0.4
Rab40bQ8VHP8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms