Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim68Q8K243 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim68Q8K243 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim68Q8K243 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim68Q8K243 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim68Q8K243 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim68Q8K243 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Trim68Q8K243 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim68Q8K243 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.2■□□□□ 0.98
Trim68Q8K243 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.2■□□□□ 0.98
Trim68Q8K243 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Trim68Q8K243 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim68Q8K243 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim68Q8K243 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Trim68Q8K243 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim68Q8K243 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.19■□□□□ 0.98
Trim68Q8K243 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim68Q8K243 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim68Q8K243 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trim68Q8K243 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim68Q8K243 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Trim68Q8K243 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.19■□□□□ 0.98
Trim68Q8K243 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim68Q8K243 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim68Q8K243 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim68Q8K243 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim68Q8K243 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim68Q8K243 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Trim68Q8K243 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim68Q8K243 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim68Q8K243 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim68Q8K243 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Trim68Q8K243 Gm11421-201ENSMUST00000122124 294 ntBASIC21.18■□□□□ 0.98
Trim68Q8K243 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim68Q8K243 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Trim68Q8K243 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.18■□□□□ 0.98
Trim68Q8K243 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim68Q8K243 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim68Q8K243 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim68Q8K243 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim68Q8K243 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim68Q8K243 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim68Q8K243 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim68Q8K243 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.17■□□□□ 0.98
Trim68Q8K243 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.17■□□□□ 0.98
Trim68Q8K243 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.17■□□□□ 0.98
Trim68Q8K243 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.17■□□□□ 0.98
Trim68Q8K243 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim68Q8K243 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim68Q8K243 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim68Q8K243 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim68Q8K243 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim68Q8K243 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Trim68Q8K243 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim68Q8K243 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim68Q8K243 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim68Q8K243 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trim68Q8K243 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim68Q8K243 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Trim68Q8K243 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim68Q8K243 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.16■□□□□ 0.98
Trim68Q8K243 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim68Q8K243 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim68Q8K243 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.15■□□□□ 0.98
Trim68Q8K243 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Trim68Q8K243 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim68Q8K243 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim68Q8K243 Gm9988-201ENSMUST00000069786 435 ntBASIC21.15■□□□□ 0.98
Trim68Q8K243 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Trim68Q8K243 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim68Q8K243 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim68Q8K243 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim68Q8K243 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Trim68Q8K243 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim68Q8K243 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
Trim68Q8K243 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim68Q8K243 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
Trim68Q8K243 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim68Q8K243 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim68Q8K243 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim68Q8K243 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim68Q8K243 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim68Q8K243 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim68Q8K243 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim68Q8K243 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.12■□□□□ 0.97
Trim68Q8K243 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim68Q8K243 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim68Q8K243 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Trim68Q8K243 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim68Q8K243 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim68Q8K243 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.12■□□□□ 0.97
Trim68Q8K243 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.12■□□□□ 0.97
Trim68Q8K243 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim68Q8K243 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim68Q8K243 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim68Q8K243 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.11■□□□□ 0.97
Trim68Q8K243 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim68Q8K243 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim68Q8K243 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Trim68Q8K243 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms