Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cnot3Q8K0V4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Cnot3Q8K0V4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cnot3Q8K0V4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cnot3Q8K0V4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cnot3Q8K0V4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cnot3Q8K0V4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cnot3Q8K0V4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cnot3Q8K0V4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cnot3Q8K0V4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cnot3Q8K0V4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.42■□□□□ 0.54
Cnot3Q8K0V4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cnot3Q8K0V4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cnot3Q8K0V4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cnot3Q8K0V4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cnot3Q8K0V4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cnot3Q8K0V4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cnot3Q8K0V4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cnot3Q8K0V4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cnot3Q8K0V4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cnot3Q8K0V4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cnot3Q8K0V4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cnot3Q8K0V4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cnot3Q8K0V4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Cnot3Q8K0V4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cnot3Q8K0V4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cnot3Q8K0V4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cnot3Q8K0V4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cnot3Q8K0V4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cnot3Q8K0V4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cnot3Q8K0V4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cnot3Q8K0V4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cnot3Q8K0V4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cnot3Q8K0V4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cnot3Q8K0V4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cnot3Q8K0V4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cnot3Q8K0V4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Cnot3Q8K0V4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cnot3Q8K0V4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cnot3Q8K0V4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Cnot3Q8K0V4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cnot3Q8K0V4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cnot3Q8K0V4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cnot3Q8K0V4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cnot3Q8K0V4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cnot3Q8K0V4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Cnot3Q8K0V4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnot3Q8K0V4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnot3Q8K0V4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnot3Q8K0V4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnot3Q8K0V4 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.38■□□□□ 0.53
Cnot3Q8K0V4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnot3Q8K0V4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnot3Q8K0V4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnot3Q8K0V4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cnot3Q8K0V4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnot3Q8K0V4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnot3Q8K0V4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnot3Q8K0V4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cnot3Q8K0V4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.37■□□□□ 0.53
Cnot3Q8K0V4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cnot3Q8K0V4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cnot3Q8K0V4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Cnot3Q8K0V4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cnot3Q8K0V4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.37■□□□□ 0.53
Cnot3Q8K0V4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.37■□□□□ 0.53
Cnot3Q8K0V4 Gm10399-202ENSMUST00000202768 748 ntBASIC18.37■□□□□ 0.53
Cnot3Q8K0V4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.37■□□□□ 0.53
Cnot3Q8K0V4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cnot3Q8K0V4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnot3Q8K0V4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnot3Q8K0V4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cnot3Q8K0V4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnot3Q8K0V4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnot3Q8K0V4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnot3Q8K0V4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cnot3Q8K0V4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.36■□□□□ 0.53
Cnot3Q8K0V4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cnot3Q8K0V4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnot3Q8K0V4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnot3Q8K0V4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cnot3Q8K0V4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cnot3Q8K0V4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnot3Q8K0V4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnot3Q8K0V4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnot3Q8K0V4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cnot3Q8K0V4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cnot3Q8K0V4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cnot3Q8K0V4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cnot3Q8K0V4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cnot3Q8K0V4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cnot3Q8K0V4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cnot3Q8K0V4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cnot3Q8K0V4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cnot3Q8K0V4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnot3Q8K0V4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Cnot3Q8K0V4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cnot3Q8K0V4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cnot3Q8K0V4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cnot3Q8K0V4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms