Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ShfQ8CG80 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ShfQ8CG80 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ShfQ8CG80 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ShfQ8CG80 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.52■□□□□ 0.4
ShfQ8CG80 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
ShfQ8CG80 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ShfQ8CG80 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ShfQ8CG80 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ShfQ8CG80 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ShfQ8CG80 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.52■□□□□ 0.39
ShfQ8CG80 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShfQ8CG80 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShfQ8CG80 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShfQ8CG80 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShfQ8CG80 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ShfQ8CG80 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
ShfQ8CG80 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ShfQ8CG80 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.51■□□□□ 0.39
ShfQ8CG80 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShfQ8CG80 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShfQ8CG80 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ShfQ8CG80 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShfQ8CG80 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ShfQ8CG80 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
ShfQ8CG80 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShfQ8CG80 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShfQ8CG80 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.5■□□□□ 0.39
ShfQ8CG80 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ShfQ8CG80 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShfQ8CG80 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShfQ8CG80 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShfQ8CG80 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShfQ8CG80 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShfQ8CG80 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShfQ8CG80 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.5■□□□□ 0.39
ShfQ8CG80 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShfQ8CG80 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShfQ8CG80 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ShfQ8CG80 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ShfQ8CG80 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.5■□□□□ 0.39
ShfQ8CG80 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ShfQ8CG80 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ShfQ8CG80 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ShfQ8CG80 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ShfQ8CG80 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShfQ8CG80 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
ShfQ8CG80 AA386476-201ENSMUST00000098781 1665 ntBASIC17.49■□□□□ 0.39
ShfQ8CG80 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
ShfQ8CG80 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.49■□□□□ 0.39
ShfQ8CG80 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ShfQ8CG80 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShfQ8CG80 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
ShfQ8CG80 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShfQ8CG80 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ShfQ8CG80 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShfQ8CG80 Gm5812-201ENSMUST00000061073 957 ntBASIC17.49■□□□□ 0.39
ShfQ8CG80 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShfQ8CG80 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShfQ8CG80 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ShfQ8CG80 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShfQ8CG80 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ShfQ8CG80 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.48■□□□□ 0.39
ShfQ8CG80 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.48■□□□□ 0.39
ShfQ8CG80 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ShfQ8CG80 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.48■□□□□ 0.39
ShfQ8CG80 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ShfQ8CG80 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ShfQ8CG80 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.48■□□□□ 0.39
ShfQ8CG80 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ShfQ8CG80 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ShfQ8CG80 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShfQ8CG80 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShfQ8CG80 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShfQ8CG80 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShfQ8CG80 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShfQ8CG80 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ShfQ8CG80 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ShfQ8CG80 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ShfQ8CG80 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ShfQ8CG80 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
ShfQ8CG80 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ShfQ8CG80 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ShfQ8CG80 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ShfQ8CG80 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ShfQ8CG80 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ShfQ8CG80 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ShfQ8CG80 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ShfQ8CG80 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ShfQ8CG80 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.45■□□□□ 0.38
ShfQ8CG80 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.45■□□□□ 0.38
ShfQ8CG80 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ShfQ8CG80 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ShfQ8CG80 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ShfQ8CG80 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ShfQ8CG80 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ShfQ8CG80 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ShfQ8CG80 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ShfQ8CG80 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ShfQ8CG80 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms