Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Vcpip1Q8CDG3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Vcpip1Q8CDG3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.09■□□□□ 0.97
Vcpip1Q8CDG3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Vcpip1Q8CDG3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vcpip1Q8CDG3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vcpip1Q8CDG3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vcpip1Q8CDG3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Vcpip1Q8CDG3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vcpip1Q8CDG3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Vcpip1Q8CDG3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.09■□□□□ 0.97
Vcpip1Q8CDG3 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.09■□□□□ 0.97
Vcpip1Q8CDG3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vcpip1Q8CDG3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vcpip1Q8CDG3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.08■□□□□ 0.97
Vcpip1Q8CDG3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vcpip1Q8CDG3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Vcpip1Q8CDG3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Vcpip1Q8CDG3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vcpip1Q8CDG3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vcpip1Q8CDG3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Vcpip1Q8CDG3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.08■□□□□ 0.97
Vcpip1Q8CDG3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vcpip1Q8CDG3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vcpip1Q8CDG3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Vcpip1Q8CDG3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
Vcpip1Q8CDG3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vcpip1Q8CDG3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vcpip1Q8CDG3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vcpip1Q8CDG3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vcpip1Q8CDG3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vcpip1Q8CDG3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Vcpip1Q8CDG3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Vcpip1Q8CDG3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vcpip1Q8CDG3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vcpip1Q8CDG3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Vcpip1Q8CDG3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vcpip1Q8CDG3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vcpip1Q8CDG3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Vcpip1Q8CDG3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Vcpip1Q8CDG3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vcpip1Q8CDG3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Vcpip1Q8CDG3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vcpip1Q8CDG3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Vcpip1Q8CDG3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vcpip1Q8CDG3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.05■□□□□ 0.96
Vcpip1Q8CDG3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.05■□□□□ 0.96
Vcpip1Q8CDG3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Vcpip1Q8CDG3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Vcpip1Q8CDG3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Vcpip1Q8CDG3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.04■□□□□ 0.96
Vcpip1Q8CDG3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Vcpip1Q8CDG3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vcpip1Q8CDG3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vcpip1Q8CDG3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vcpip1Q8CDG3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Vcpip1Q8CDG3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vcpip1Q8CDG3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vcpip1Q8CDG3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vcpip1Q8CDG3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vcpip1Q8CDG3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Vcpip1Q8CDG3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vcpip1Q8CDG3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vcpip1Q8CDG3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vcpip1Q8CDG3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vcpip1Q8CDG3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vcpip1Q8CDG3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vcpip1Q8CDG3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Vcpip1Q8CDG3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Vcpip1Q8CDG3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
Vcpip1Q8CDG3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vcpip1Q8CDG3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vcpip1Q8CDG3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Vcpip1Q8CDG3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Vcpip1Q8CDG3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vcpip1Q8CDG3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.02■□□□□ 0.96
Vcpip1Q8CDG3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vcpip1Q8CDG3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vcpip1Q8CDG3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Vcpip1Q8CDG3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Vcpip1Q8CDG3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.01■□□□□ 0.95
Vcpip1Q8CDG3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vcpip1Q8CDG3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.01■□□□□ 0.95
Vcpip1Q8CDG3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Vcpip1Q8CDG3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vcpip1Q8CDG3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.01■□□□□ 0.95
Vcpip1Q8CDG3 Gm9847-201ENSMUST00000052528 599 ntBASIC21.01■□□□□ 0.95
Vcpip1Q8CDG3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
Vcpip1Q8CDG3 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.01■□□□□ 0.95
Vcpip1Q8CDG3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Vcpip1Q8CDG3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Vcpip1Q8CDG3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21■□□□□ 0.95
Vcpip1Q8CDG3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21■□□□□ 0.95
Vcpip1Q8CDG3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21■□□□□ 0.95
Vcpip1Q8CDG3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Vcpip1Q8CDG3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21■□□□□ 0.95
Vcpip1Q8CDG3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vcpip1Q8CDG3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vcpip1Q8CDG3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vcpip1Q8CDG3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms