Protein–RNA interactions for Protein: Q8CB44

Gramd4, GRAM domain-containing protein 4, mousemouse

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gramd4Q8CB44 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gramd4Q8CB44 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.34■□□□□ 0.85
Gramd4Q8CB44 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.34■□□□□ 0.85
Gramd4Q8CB44 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gramd4Q8CB44 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gramd4Q8CB44 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gramd4Q8CB44 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Gramd4Q8CB44 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gramd4Q8CB44 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gramd4Q8CB44 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gramd4Q8CB44 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gramd4Q8CB44 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gramd4Q8CB44 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gramd4Q8CB44 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gramd4Q8CB44 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gramd4Q8CB44 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gramd4Q8CB44 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gramd4Q8CB44 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gramd4Q8CB44 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gramd4Q8CB44 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.33■□□□□ 0.84
Gramd4Q8CB44 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gramd4Q8CB44 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Gramd4Q8CB44 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gramd4Q8CB44 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gramd4Q8CB44 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Gramd4Q8CB44 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Gramd4Q8CB44 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gramd4Q8CB44 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Gramd4Q8CB44 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gramd4Q8CB44 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gramd4Q8CB44 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Gramd4Q8CB44 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Gramd4Q8CB44 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Gramd4Q8CB44 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gramd4Q8CB44 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gramd4Q8CB44 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gramd4Q8CB44 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Gramd4Q8CB44 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gramd4Q8CB44 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gramd4Q8CB44 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gramd4Q8CB44 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gramd4Q8CB44 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gramd4Q8CB44 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gramd4Q8CB44 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Gramd4Q8CB44 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gramd4Q8CB44 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Gramd4Q8CB44 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gramd4Q8CB44 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gramd4Q8CB44 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Gramd4Q8CB44 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gramd4Q8CB44 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Gramd4Q8CB44 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Gramd4Q8CB44 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gramd4Q8CB44 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gramd4Q8CB44 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gramd4Q8CB44 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gramd4Q8CB44 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gramd4Q8CB44 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gramd4Q8CB44 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gramd4Q8CB44 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Gramd4Q8CB44 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.29■□□□□ 0.84
Gramd4Q8CB44 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gramd4Q8CB44 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gramd4Q8CB44 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gramd4Q8CB44 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.29■□□□□ 0.84
Gramd4Q8CB44 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gramd4Q8CB44 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gramd4Q8CB44 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Gramd4Q8CB44 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Gramd4Q8CB44 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gramd4Q8CB44 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gramd4Q8CB44 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gramd4Q8CB44 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gramd4Q8CB44 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gramd4Q8CB44 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Gramd4Q8CB44 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gramd4Q8CB44 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Gramd4Q8CB44 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gramd4Q8CB44 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gramd4Q8CB44 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gramd4Q8CB44 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gramd4Q8CB44 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Gramd4Q8CB44 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gramd4Q8CB44 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gramd4Q8CB44 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.28■□□□□ 0.84
Gramd4Q8CB44 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gramd4Q8CB44 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gramd4Q8CB44 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Gramd4Q8CB44 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gramd4Q8CB44 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Gramd4Q8CB44 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Gramd4Q8CB44 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gramd4Q8CB44 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gramd4Q8CB44 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Gramd4Q8CB44 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gramd4Q8CB44 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gramd4Q8CB44 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gramd4Q8CB44 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gramd4Q8CB44 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gramd4Q8CB44 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms