Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.92■□□□□ 0.78
Rfx6Q8C7R7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.92■□□□□ 0.78
Rfx6Q8C7R7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx6Q8C7R7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx6Q8C7R7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Rfx6Q8C7R7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx6Q8C7R7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx6Q8C7R7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Rfx6Q8C7R7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx6Q8C7R7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Rfx6Q8C7R7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx6Q8C7R7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx6Q8C7R7 Gm15820-201ENSMUST00000201566 728 ntBASIC19.91■□□□□ 0.78
Rfx6Q8C7R7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx6Q8C7R7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx6Q8C7R7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx6Q8C7R7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rfx6Q8C7R7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx6Q8C7R7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx6Q8C7R7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Rfx6Q8C7R7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.9■□□□□ 0.78
Rfx6Q8C7R7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx6Q8C7R7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx6Q8C7R7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx6Q8C7R7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx6Q8C7R7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Rfx6Q8C7R7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx6Q8C7R7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rfx6Q8C7R7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rfx6Q8C7R7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
Rfx6Q8C7R7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.89■□□□□ 0.77
Rfx6Q8C7R7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfx6Q8C7R7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Rfx6Q8C7R7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfx6Q8C7R7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfx6Q8C7R7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfx6Q8C7R7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Rfx6Q8C7R7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx6Q8C7R7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.88■□□□□ 0.77
Rfx6Q8C7R7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx6Q8C7R7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.88■□□□□ 0.77
Rfx6Q8C7R7 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.88■□□□□ 0.77
Rfx6Q8C7R7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx6Q8C7R7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx6Q8C7R7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx6Q8C7R7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx6Q8C7R7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.87■□□□□ 0.77
Rfx6Q8C7R7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Rfx6Q8C7R7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx6Q8C7R7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.87■□□□□ 0.77
Rfx6Q8C7R7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx6Q8C7R7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx6Q8C7R7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx6Q8C7R7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx6Q8C7R7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Rfx6Q8C7R7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx6Q8C7R7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx6Q8C7R7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx6Q8C7R7 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.86■□□□□ 0.77
Rfx6Q8C7R7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Rfx6Q8C7R7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx6Q8C7R7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx6Q8C7R7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx6Q8C7R7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx6Q8C7R7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx6Q8C7R7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx6Q8C7R7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.85■□□□□ 0.77
Rfx6Q8C7R7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.85■□□□□ 0.77
Rfx6Q8C7R7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.85■□□□□ 0.77
Rfx6Q8C7R7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx6Q8C7R7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.85■□□□□ 0.77
Rfx6Q8C7R7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx6Q8C7R7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx6Q8C7R7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rfx6Q8C7R7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx6Q8C7R7 Etf1-202ENSMUST00000180351 108 ntBASIC19.84■□□□□ 0.77
Rfx6Q8C7R7 Gm7417-201ENSMUST00000192950 473 ntBASIC19.84■□□□□ 0.77
Rfx6Q8C7R7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Rfx6Q8C7R7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Rfx6Q8C7R7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx6Q8C7R7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rfx6Q8C7R7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Rfx6Q8C7R7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx6Q8C7R7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx6Q8C7R7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rfx6Q8C7R7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfx6Q8C7R7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfx6Q8C7R7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rfx6Q8C7R7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rfx6Q8C7R7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfx6Q8C7R7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rfx6Q8C7R7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Rfx6Q8C7R7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Rfx6Q8C7R7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Rfx6Q8C7R7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Rfx6Q8C7R7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rfx6Q8C7R7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.83■□□□□ 0.76
Rfx6Q8C7R7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Rfx6Q8C7R7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx6Q8C7R7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms