Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scfd1Q8BRF7 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.6■■□□□ 1.21
Scfd1Q8BRF7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scfd1Q8BRF7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scfd1Q8BRF7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scfd1Q8BRF7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Scfd1Q8BRF7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scfd1Q8BRF7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Scfd1Q8BRF7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Scfd1Q8BRF7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scfd1Q8BRF7 AA386476-201ENSMUST00000098781 1665 ntBASIC22.59■■□□□ 1.21
Scfd1Q8BRF7 Gm29257-201ENSMUST00000186115 639 ntBASIC22.59■■□□□ 1.21
Scfd1Q8BRF7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC22.59■■□□□ 1.21
Scfd1Q8BRF7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Scfd1Q8BRF7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scfd1Q8BRF7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Scfd1Q8BRF7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scfd1Q8BRF7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC22.58■■□□□ 1.21
Scfd1Q8BRF7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
Scfd1Q8BRF7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Scfd1Q8BRF7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Scfd1Q8BRF7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC22.58■■□□□ 1.21
Scfd1Q8BRF7 Gm5297-201ENSMUST00000198555 1171 ntBASIC22.58■■□□□ 1.21
Scfd1Q8BRF7 AC154266.1-201ENSMUST00000223190 503 ntBASIC22.58■■□□□ 1.21
Scfd1Q8BRF7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Scfd1Q8BRF7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Scfd1Q8BRF7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Scfd1Q8BRF7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scfd1Q8BRF7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Scfd1Q8BRF7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scfd1Q8BRF7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.57■■□□□ 1.2
Scfd1Q8BRF7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scfd1Q8BRF7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scfd1Q8BRF7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Scfd1Q8BRF7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scfd1Q8BRF7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Scfd1Q8BRF7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scfd1Q8BRF7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.56■■□□□ 1.2
Scfd1Q8BRF7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC22.56■■□□□ 1.2
Scfd1Q8BRF7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC22.56■■□□□ 1.2
Scfd1Q8BRF7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC22.56■■□□□ 1.2
Scfd1Q8BRF7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scfd1Q8BRF7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scfd1Q8BRF7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scfd1Q8BRF7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scfd1Q8BRF7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scfd1Q8BRF7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Scfd1Q8BRF7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Scfd1Q8BRF7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC22.55■■□□□ 1.2
Scfd1Q8BRF7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Scfd1Q8BRF7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scfd1Q8BRF7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Scfd1Q8BRF7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
Scfd1Q8BRF7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC22.54■■□□□ 1.2
Scfd1Q8BRF7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Scfd1Q8BRF7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scfd1Q8BRF7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scfd1Q8BRF7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC22.54■■□□□ 1.2
Scfd1Q8BRF7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC22.54■■□□□ 1.2
Scfd1Q8BRF7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Scfd1Q8BRF7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scfd1Q8BRF7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Scfd1Q8BRF7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scfd1Q8BRF7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC22.53■■□□□ 1.2
Scfd1Q8BRF7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scfd1Q8BRF7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scfd1Q8BRF7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Scfd1Q8BRF7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC22.52■■□□□ 1.2
Scfd1Q8BRF7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Scfd1Q8BRF7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Scfd1Q8BRF7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC22.52■■□□□ 1.2
Scfd1Q8BRF7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Scfd1Q8BRF7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Scfd1Q8BRF7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC22.51■■□□□ 1.19
Scfd1Q8BRF7 CT030146.1-201ENSMUST00000220919 217 ntBASIC22.51■■□□□ 1.19
Scfd1Q8BRF7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Scfd1Q8BRF7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Scfd1Q8BRF7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Scfd1Q8BRF7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Scfd1Q8BRF7 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.5■■□□□ 1.19
Scfd1Q8BRF7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Scfd1Q8BRF7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC22.5■■□□□ 1.19
Scfd1Q8BRF7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Scfd1Q8BRF7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Scfd1Q8BRF7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Scfd1Q8BRF7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC22.49■■□□□ 1.19
Scfd1Q8BRF7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Scfd1Q8BRF7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Scfd1Q8BRF7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Scfd1Q8BRF7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scfd1Q8BRF7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Scfd1Q8BRF7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Scfd1Q8BRF7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC22.48■■□□□ 1.19
Scfd1Q8BRF7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Scfd1Q8BRF7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scfd1Q8BRF7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scfd1Q8BRF7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Scfd1Q8BRF7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Scfd1Q8BRF7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Scfd1Q8BRF7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms