Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smco3Q8BQM7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smco3Q8BQM7 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.17■□□□□ 0.18
Smco3Q8BQM7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.17■□□□□ 0.18
Smco3Q8BQM7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smco3Q8BQM7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Smco3Q8BQM7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.17■□□□□ 0.18
Smco3Q8BQM7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.17■□□□□ 0.18
Smco3Q8BQM7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Smco3Q8BQM7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smco3Q8BQM7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smco3Q8BQM7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smco3Q8BQM7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smco3Q8BQM7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smco3Q8BQM7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smco3Q8BQM7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smco3Q8BQM7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smco3Q8BQM7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smco3Q8BQM7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smco3Q8BQM7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smco3Q8BQM7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Smco3Q8BQM7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smco3Q8BQM7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smco3Q8BQM7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smco3Q8BQM7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smco3Q8BQM7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smco3Q8BQM7 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Smco3Q8BQM7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smco3Q8BQM7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smco3Q8BQM7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Smco3Q8BQM7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Smco3Q8BQM7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Smco3Q8BQM7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.15■□□□□ 0.18
Smco3Q8BQM7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Smco3Q8BQM7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smco3Q8BQM7 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smco3Q8BQM7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smco3Q8BQM7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smco3Q8BQM7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Smco3Q8BQM7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smco3Q8BQM7 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.15■□□□□ 0.18
Smco3Q8BQM7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Smco3Q8BQM7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smco3Q8BQM7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smco3Q8BQM7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smco3Q8BQM7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smco3Q8BQM7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smco3Q8BQM7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Smco3Q8BQM7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Smco3Q8BQM7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smco3Q8BQM7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smco3Q8BQM7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Smco3Q8BQM7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smco3Q8BQM7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smco3Q8BQM7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smco3Q8BQM7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smco3Q8BQM7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smco3Q8BQM7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smco3Q8BQM7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smco3Q8BQM7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smco3Q8BQM7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Smco3Q8BQM7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smco3Q8BQM7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smco3Q8BQM7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smco3Q8BQM7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smco3Q8BQM7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smco3Q8BQM7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.12■□□□□ 0.17
Smco3Q8BQM7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smco3Q8BQM7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.12■□□□□ 0.17
Smco3Q8BQM7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smco3Q8BQM7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smco3Q8BQM7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smco3Q8BQM7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smco3Q8BQM7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
Smco3Q8BQM7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smco3Q8BQM7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Smco3Q8BQM7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.11■□□□□ 0.17
Smco3Q8BQM7 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.11■□□□□ 0.17
Smco3Q8BQM7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smco3Q8BQM7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smco3Q8BQM7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.11■□□□□ 0.17
Smco3Q8BQM7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smco3Q8BQM7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smco3Q8BQM7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smco3Q8BQM7 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.11■□□□□ 0.17
Smco3Q8BQM7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Smco3Q8BQM7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smco3Q8BQM7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Smco3Q8BQM7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smco3Q8BQM7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smco3Q8BQM7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smco3Q8BQM7 Gm14523-201ENSMUST00000117260 558 ntBASIC16.1■□□□□ 0.17
Smco3Q8BQM7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.1■□□□□ 0.17
Smco3Q8BQM7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Smco3Q8BQM7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.1■□□□□ 0.17
Smco3Q8BQM7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smco3Q8BQM7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smco3Q8BQM7 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.1■□□□□ 0.17
Smco3Q8BQM7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smco3Q8BQM7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms