Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Scn3bQ8BHK2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scn3bQ8BHK2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Scn3bQ8BHK2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Scn3bQ8BHK2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Scn3bQ8BHK2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Scn3bQ8BHK2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Scn3bQ8BHK2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn3bQ8BHK2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn3bQ8BHK2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.24■□□□□ 0.51
Scn3bQ8BHK2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Scn3bQ8BHK2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.24■□□□□ 0.51
Scn3bQ8BHK2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scn3bQ8BHK2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn3bQ8BHK2 Golph3-205ENSMUST00000228671 2842 ntBASIC18.24■□□□□ 0.51
Scn3bQ8BHK2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn3bQ8BHK2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn3bQ8BHK2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn3bQ8BHK2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Scn3bQ8BHK2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn3bQ8BHK2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Scn3bQ8BHK2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scn3bQ8BHK2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.23■□□□□ 0.51
Scn3bQ8BHK2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn3bQ8BHK2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.23■□□□□ 0.51
Scn3bQ8BHK2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Scn3bQ8BHK2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Scn3bQ8BHK2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scn3bQ8BHK2 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.23■□□□□ 0.51
Scn3bQ8BHK2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn3bQ8BHK2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
Scn3bQ8BHK2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.22■□□□□ 0.51
Scn3bQ8BHK2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn3bQ8BHK2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn3bQ8BHK2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn3bQ8BHK2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn3bQ8BHK2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.22■□□□□ 0.51
Scn3bQ8BHK2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn3bQ8BHK2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.22■□□□□ 0.51
Scn3bQ8BHK2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Scn3bQ8BHK2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn3bQ8BHK2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn3bQ8BHK2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Scn3bQ8BHK2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn3bQ8BHK2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn3bQ8BHK2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn3bQ8BHK2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn3bQ8BHK2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn3bQ8BHK2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn3bQ8BHK2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn3bQ8BHK2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.21■□□□□ 0.51
Scn3bQ8BHK2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn3bQ8BHK2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn3bQ8BHK2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Scn3bQ8BHK2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn3bQ8BHK2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn3bQ8BHK2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Scn3bQ8BHK2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn3bQ8BHK2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn3bQ8BHK2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn3bQ8BHK2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn3bQ8BHK2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Scn3bQ8BHK2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn3bQ8BHK2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn3bQ8BHK2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn3bQ8BHK2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn3bQ8BHK2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Scn3bQ8BHK2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn3bQ8BHK2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn3bQ8BHK2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn3bQ8BHK2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn3bQ8BHK2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.19■□□□□ 0.5
Scn3bQ8BHK2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn3bQ8BHK2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn3bQ8BHK2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn3bQ8BHK2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn3bQ8BHK2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn3bQ8BHK2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn3bQ8BHK2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn3bQ8BHK2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn3bQ8BHK2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.18■□□□□ 0.5
Scn3bQ8BHK2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn3bQ8BHK2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Scn3bQ8BHK2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn3bQ8BHK2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Scn3bQ8BHK2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scn3bQ8BHK2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Scn3bQ8BHK2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn3bQ8BHK2 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.18■□□□□ 0.5
Scn3bQ8BHK2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn3bQ8BHK2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Scn3bQ8BHK2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn3bQ8BHK2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Scn3bQ8BHK2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Scn3bQ8BHK2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scn3bQ8BHK2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Scn3bQ8BHK2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Scn3bQ8BHK2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn3bQ8BHK2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Scn3bQ8BHK2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms