Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zc3hc1Q80YV2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Zc3hc1Q80YV2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zc3hc1Q80YV2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Zc3hc1Q80YV2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
Zc3hc1Q80YV2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Zc3hc1Q80YV2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Zc3hc1Q80YV2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Zc3hc1Q80YV2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.89■□□□□ 0.45
Zc3hc1Q80YV2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zc3hc1Q80YV2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Zc3hc1Q80YV2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.89■□□□□ 0.45
Zc3hc1Q80YV2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Zc3hc1Q80YV2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zc3hc1Q80YV2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zc3hc1Q80YV2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zc3hc1Q80YV2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zc3hc1Q80YV2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.88■□□□□ 0.45
Zc3hc1Q80YV2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Zc3hc1Q80YV2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zc3hc1Q80YV2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zc3hc1Q80YV2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zc3hc1Q80YV2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zc3hc1Q80YV2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zc3hc1Q80YV2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zc3hc1Q80YV2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zc3hc1Q80YV2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zc3hc1Q80YV2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Zc3hc1Q80YV2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zc3hc1Q80YV2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zc3hc1Q80YV2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zc3hc1Q80YV2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zc3hc1Q80YV2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.87■□□□□ 0.45
Zc3hc1Q80YV2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zc3hc1Q80YV2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Zc3hc1Q80YV2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.87■□□□□ 0.45
Zc3hc1Q80YV2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zc3hc1Q80YV2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zc3hc1Q80YV2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zc3hc1Q80YV2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Zc3hc1Q80YV2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Zc3hc1Q80YV2 Cap2-205ENSMUST00000225824 1634 ntBASIC17.87■□□□□ 0.45
Zc3hc1Q80YV2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Zc3hc1Q80YV2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Zc3hc1Q80YV2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Zc3hc1Q80YV2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Zc3hc1Q80YV2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Zc3hc1Q80YV2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Zc3hc1Q80YV2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Zc3hc1Q80YV2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Zc3hc1Q80YV2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Zc3hc1Q80YV2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Zc3hc1Q80YV2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Zc3hc1Q80YV2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Zc3hc1Q80YV2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Zc3hc1Q80YV2 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.86■□□□□ 0.45
Zc3hc1Q80YV2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Zc3hc1Q80YV2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.85■□□□□ 0.45
Zc3hc1Q80YV2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.85■□□□□ 0.45
Zc3hc1Q80YV2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.85■□□□□ 0.45
Zc3hc1Q80YV2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zc3hc1Q80YV2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.85■□□□□ 0.45
Zc3hc1Q80YV2 Gm40881-201ENSMUST00000223397 166 ntBASIC17.85■□□□□ 0.45
Zc3hc1Q80YV2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zc3hc1Q80YV2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Zc3hc1Q80YV2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Zc3hc1Q80YV2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Zc3hc1Q80YV2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Zc3hc1Q80YV2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Zc3hc1Q80YV2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Zc3hc1Q80YV2 Golph3-205ENSMUST00000228671 2842 ntBASIC17.84■□□□□ 0.45
Zc3hc1Q80YV2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Zc3hc1Q80YV2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Zc3hc1Q80YV2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Zc3hc1Q80YV2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Zc3hc1Q80YV2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Zc3hc1Q80YV2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Zc3hc1Q80YV2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Zc3hc1Q80YV2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Zc3hc1Q80YV2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Zc3hc1Q80YV2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Zc3hc1Q80YV2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Zc3hc1Q80YV2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Zc3hc1Q80YV2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Zc3hc1Q80YV2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Zc3hc1Q80YV2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Zc3hc1Q80YV2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Zc3hc1Q80YV2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.83■□□□□ 0.44
Zc3hc1Q80YV2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Zc3hc1Q80YV2 Gm43530-201ENSMUST00000195920 274 ntBASIC17.83■□□□□ 0.44
Zc3hc1Q80YV2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Zc3hc1Q80YV2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Zc3hc1Q80YV2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Zc3hc1Q80YV2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Zc3hc1Q80YV2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Zc3hc1Q80YV2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zc3hc1Q80YV2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zc3hc1Q80YV2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Zc3hc1Q80YV2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.82■□□□□ 0.44
Zc3hc1Q80YV2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms