Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prdm4Q80V63 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prdm4Q80V63 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.32■□□□□ 0.84
Prdm4Q80V63 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.32■□□□□ 0.84
Prdm4Q80V63 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prdm4Q80V63 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prdm4Q80V63 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Prdm4Q80V63 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.32■□□□□ 0.84
Prdm4Q80V63 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prdm4Q80V63 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Prdm4Q80V63 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prdm4Q80V63 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prdm4Q80V63 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prdm4Q80V63 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Prdm4Q80V63 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prdm4Q80V63 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Prdm4Q80V63 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prdm4Q80V63 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Prdm4Q80V63 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Prdm4Q80V63 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Prdm4Q80V63 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Prdm4Q80V63 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prdm4Q80V63 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prdm4Q80V63 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prdm4Q80V63 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.3■□□□□ 0.84
Prdm4Q80V63 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm4Q80V63 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm4Q80V63 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm4Q80V63 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.3■□□□□ 0.84
Prdm4Q80V63 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.3■□□□□ 0.84
Prdm4Q80V63 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.3■□□□□ 0.84
Prdm4Q80V63 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.3■□□□□ 0.84
Prdm4Q80V63 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm4Q80V63 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm4Q80V63 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm4Q80V63 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Prdm4Q80V63 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Prdm4Q80V63 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prdm4Q80V63 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prdm4Q80V63 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prdm4Q80V63 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prdm4Q80V63 Gm13238-201ENSMUST00000117655 780 ntBASIC20.29■□□□□ 0.84
Prdm4Q80V63 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prdm4Q80V63 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prdm4Q80V63 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prdm4Q80V63 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prdm4Q80V63 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prdm4Q80V63 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prdm4Q80V63 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Prdm4Q80V63 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Prdm4Q80V63 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Prdm4Q80V63 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Prdm4Q80V63 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prdm4Q80V63 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.28■□□□□ 0.84
Prdm4Q80V63 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prdm4Q80V63 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prdm4Q80V63 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prdm4Q80V63 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prdm4Q80V63 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prdm4Q80V63 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Prdm4Q80V63 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prdm4Q80V63 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prdm4Q80V63 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Prdm4Q80V63 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.27■□□□□ 0.84
Prdm4Q80V63 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.27■□□□□ 0.84
Prdm4Q80V63 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prdm4Q80V63 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Prdm4Q80V63 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.27■□□□□ 0.83
Prdm4Q80V63 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prdm4Q80V63 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prdm4Q80V63 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prdm4Q80V63 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prdm4Q80V63 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prdm4Q80V63 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.26■□□□□ 0.83
Prdm4Q80V63 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Prdm4Q80V63 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prdm4Q80V63 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prdm4Q80V63 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prdm4Q80V63 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prdm4Q80V63 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prdm4Q80V63 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prdm4Q80V63 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prdm4Q80V63 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Prdm4Q80V63 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prdm4Q80V63 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prdm4Q80V63 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prdm4Q80V63 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Prdm4Q80V63 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prdm4Q80V63 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prdm4Q80V63 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prdm4Q80V63 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.24■□□□□ 0.83
Prdm4Q80V63 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.24■□□□□ 0.83
Prdm4Q80V63 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prdm4Q80V63 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prdm4Q80V63 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prdm4Q80V63 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Prdm4Q80V63 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prdm4Q80V63 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm4Q80V63 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prdm4Q80V63 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms