Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cspg5Q71M36 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cspg5Q71M36 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.25■□□□□ 0.83
Cspg5Q71M36 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cspg5Q71M36 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cspg5Q71M36 Gm11421-201ENSMUST00000122124 294 ntBASIC20.25■□□□□ 0.83
Cspg5Q71M36 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.25■□□□□ 0.83
Cspg5Q71M36 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cspg5Q71M36 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cspg5Q71M36 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cspg5Q71M36 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cspg5Q71M36 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cspg5Q71M36 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.25■□□□□ 0.83
Cspg5Q71M36 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cspg5Q71M36 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.24■□□□□ 0.83
Cspg5Q71M36 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cspg5Q71M36 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cspg5Q71M36 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cspg5Q71M36 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cspg5Q71M36 Gm10602-201ENSMUST00000098239 609 ntBASIC20.24■□□□□ 0.83
Cspg5Q71M36 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cspg5Q71M36 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cspg5Q71M36 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cspg5Q71M36 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cspg5Q71M36 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cspg5Q71M36 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Cspg5Q71M36 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Cspg5Q71M36 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cspg5Q71M36 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.23■□□□□ 0.83
Cspg5Q71M36 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.23■□□□□ 0.83
Cspg5Q71M36 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cspg5Q71M36 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cspg5Q71M36 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cspg5Q71M36 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cspg5Q71M36 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cspg5Q71M36 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cspg5Q71M36 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cspg5Q71M36 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Cspg5Q71M36 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cspg5Q71M36 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cspg5Q71M36 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cspg5Q71M36 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cspg5Q71M36 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cspg5Q71M36 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cspg5Q71M36 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cspg5Q71M36 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cspg5Q71M36 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cspg5Q71M36 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cspg5Q71M36 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.2■□□□□ 0.82
Cspg5Q71M36 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cspg5Q71M36 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cspg5Q71M36 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cspg5Q71M36 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cspg5Q71M36 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cspg5Q71M36 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cspg5Q71M36 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cspg5Q71M36 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.2■□□□□ 0.82
Cspg5Q71M36 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cspg5Q71M36 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cspg5Q71M36 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cspg5Q71M36 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cspg5Q71M36 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.19■□□□□ 0.82
Cspg5Q71M36 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.19■□□□□ 0.82
Cspg5Q71M36 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cspg5Q71M36 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cspg5Q71M36 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Cspg5Q71M36 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cspg5Q71M36 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cspg5Q71M36 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cspg5Q71M36 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cspg5Q71M36 Iqck-206ENSMUST00000208658 2891 ntBASIC20.18■□□□□ 0.82
Cspg5Q71M36 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.18■□□□□ 0.82
Cspg5Q71M36 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cspg5Q71M36 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cspg5Q71M36 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cspg5Q71M36 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cspg5Q71M36 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cspg5Q71M36 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cspg5Q71M36 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cspg5Q71M36 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.18■□□□□ 0.82
Cspg5Q71M36 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cspg5Q71M36 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cspg5Q71M36 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cspg5Q71M36 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cspg5Q71M36 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cspg5Q71M36 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cspg5Q71M36 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cspg5Q71M36 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cspg5Q71M36 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cspg5Q71M36 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.17■□□□□ 0.82
Cspg5Q71M36 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cspg5Q71M36 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.17■□□□□ 0.82
Cspg5Q71M36 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cspg5Q71M36 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cspg5Q71M36 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.17■□□□□ 0.82
Cspg5Q71M36 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cspg5Q71M36 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.16■□□□□ 0.82
Cspg5Q71M36 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cspg5Q71M36 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.16■□□□□ 0.82
Cspg5Q71M36 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms