Protein–RNA interactions for Protein: Q684R7

Frem1, FRAS1-related extracellular matrix protein 1, mousemouse

Predictions only

Length 2,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frem1Q684R7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Frem1Q684R7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.16■□□□□ 0.34
Frem1Q684R7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Frem1Q684R7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Frem1Q684R7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Frem1Q684R7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Frem1Q684R7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Frem1Q684R7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Frem1Q684R7 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.16■□□□□ 0.34
Frem1Q684R7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Frem1Q684R7 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Frem1Q684R7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Frem1Q684R7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Frem1Q684R7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Frem1Q684R7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Frem1Q684R7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.15■□□□□ 0.34
Frem1Q684R7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.15■□□□□ 0.34
Frem1Q684R7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Frem1Q684R7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Frem1Q684R7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Frem1Q684R7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Frem1Q684R7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Frem1Q684R7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Frem1Q684R7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Frem1Q684R7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.15■□□□□ 0.34
Frem1Q684R7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Frem1Q684R7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Frem1Q684R7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Frem1Q684R7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Frem1Q684R7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Frem1Q684R7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Frem1Q684R7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Frem1Q684R7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Frem1Q684R7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Frem1Q684R7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Frem1Q684R7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Frem1Q684R7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Frem1Q684R7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Frem1Q684R7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.14■□□□□ 0.33
Frem1Q684R7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Frem1Q684R7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Frem1Q684R7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.14■□□□□ 0.33
Frem1Q684R7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.14■□□□□ 0.33
Frem1Q684R7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Frem1Q684R7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Frem1Q684R7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Frem1Q684R7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Frem1Q684R7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Frem1Q684R7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Frem1Q684R7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Frem1Q684R7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Frem1Q684R7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Frem1Q684R7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Frem1Q684R7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Frem1Q684R7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Frem1Q684R7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Frem1Q684R7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Frem1Q684R7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Frem1Q684R7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Frem1Q684R7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Frem1Q684R7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.12■□□□□ 0.33
Frem1Q684R7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.12■□□□□ 0.33
Frem1Q684R7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Frem1Q684R7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Frem1Q684R7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Frem1Q684R7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Frem1Q684R7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Frem1Q684R7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Frem1Q684R7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Frem1Q684R7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Frem1Q684R7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Frem1Q684R7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.12■□□□□ 0.33
Frem1Q684R7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Frem1Q684R7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Frem1Q684R7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Frem1Q684R7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Frem1Q684R7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.11■□□□□ 0.33
Frem1Q684R7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Frem1Q684R7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Frem1Q684R7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Frem1Q684R7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Frem1Q684R7 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.11■□□□□ 0.33
Frem1Q684R7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Frem1Q684R7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.11■□□□□ 0.33
Frem1Q684R7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Frem1Q684R7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Frem1Q684R7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Frem1Q684R7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.1■□□□□ 0.33
Frem1Q684R7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Frem1Q684R7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.1■□□□□ 0.33
Frem1Q684R7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.1■□□□□ 0.33
Frem1Q684R7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Frem1Q684R7 Gm10602-201ENSMUST00000098239 609 ntBASIC17.1■□□□□ 0.33
Frem1Q684R7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Frem1Q684R7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Frem1Q684R7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Frem1Q684R7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Frem1Q684R7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Frem1Q684R7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Frem1Q684R7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms