Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-2Q5R1I4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-2Q5R1I4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-2Q5R1I4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-2Q5R1I4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-2Q5R1I4 Gm12933-201ENSMUST00000120203 872 ntBASIC17.31■□□□□ 0.36
Trav6-2Q5R1I4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trav6-2Q5R1I4 Gm7514-201ENSMUST00000209475 934 ntBASIC17.31■□□□□ 0.36
Trav6-2Q5R1I4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-2Q5R1I4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-2Q5R1I4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-2Q5R1I4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-2Q5R1I4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-2Q5R1I4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-2Q5R1I4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav6-2Q5R1I4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-2Q5R1I4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trav6-2Q5R1I4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-2Q5R1I4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-2Q5R1I4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-2Q5R1I4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-2Q5R1I4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.3■□□□□ 0.36
Trav6-2Q5R1I4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-2Q5R1I4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-2Q5R1I4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-2Q5R1I4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-2Q5R1I4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6-2Q5R1I4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6-2Q5R1I4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav6-2Q5R1I4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6-2Q5R1I4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6-2Q5R1I4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trav6-2Q5R1I4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6-2Q5R1I4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6-2Q5R1I4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.29■□□□□ 0.36
Trav6-2Q5R1I4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav6-2Q5R1I4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6-2Q5R1I4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6-2Q5R1I4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6-2Q5R1I4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6-2Q5R1I4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-2Q5R1I4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-2Q5R1I4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-2Q5R1I4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-2Q5R1I4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-2Q5R1I4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-2Q5R1I4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-2Q5R1I4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trav6-2Q5R1I4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6-2Q5R1I4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6-2Q5R1I4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6-2Q5R1I4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.27■□□□□ 0.36
Trav6-2Q5R1I4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.27■□□□□ 0.36
Trav6-2Q5R1I4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trav6-2Q5R1I4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6-2Q5R1I4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav6-2Q5R1I4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav6-2Q5R1I4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-2Q5R1I4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-2Q5R1I4 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.26■□□□□ 0.35
Trav6-2Q5R1I4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-2Q5R1I4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-2Q5R1I4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-2Q5R1I4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-2Q5R1I4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-2Q5R1I4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
Trav6-2Q5R1I4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Trav6-2Q5R1I4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6-2Q5R1I4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.25■□□□□ 0.35
Trav6-2Q5R1I4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6-2Q5R1I4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6-2Q5R1I4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-2Q5R1I4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-2Q5R1I4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-2Q5R1I4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-2Q5R1I4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-2Q5R1I4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-2Q5R1I4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-2Q5R1I4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-2Q5R1I4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trav6-2Q5R1I4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-2Q5R1I4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Trav6-2Q5R1I4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.23■□□□□ 0.35
Trav6-2Q5R1I4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.23■□□□□ 0.35
Trav6-2Q5R1I4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Trav6-2Q5R1I4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-2Q5R1I4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Trav6-2Q5R1I4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Trav6-2Q5R1I4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav6-2Q5R1I4 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.23■□□□□ 0.35
Trav6-2Q5R1I4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-2Q5R1I4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav6-2Q5R1I4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-2Q5R1I4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-2Q5R1I4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-2Q5R1I4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-2Q5R1I4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-2Q5R1I4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6-2Q5R1I4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav6-2Q5R1I4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms