Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav3-3Q5R1C3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-3Q5R1C3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-3Q5R1C3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-3Q5R1C3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav3-3Q5R1C3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-3Q5R1C3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-3Q5R1C3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-3Q5R1C3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-3Q5R1C3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-3Q5R1C3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-3Q5R1C3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-3Q5R1C3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-3Q5R1C3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-3Q5R1C3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav3-3Q5R1C3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-3Q5R1C3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-3Q5R1C3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav3-3Q5R1C3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-3Q5R1C3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-3Q5R1C3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-3Q5R1C3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-3Q5R1C3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC14.68□□□□□ -0.06
Trav3-3Q5R1C3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-3Q5R1C3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-3Q5R1C3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-3Q5R1C3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Trav3-3Q5R1C3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-3Q5R1C3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-3Q5R1C3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav3-3Q5R1C3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-3Q5R1C3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav3-3Q5R1C3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3-3Q5R1C3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav3-3Q5R1C3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3-3Q5R1C3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3-3Q5R1C3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3-3Q5R1C3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3-3Q5R1C3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav3-3Q5R1C3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3-3Q5R1C3 Gm9806-201ENSMUST00000051080 552 ntBASIC14.67□□□□□ -0.06
Trav3-3Q5R1C3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3-3Q5R1C3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3-3Q5R1C3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav3-3Q5R1C3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3-3Q5R1C3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav3-3Q5R1C3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3-3Q5R1C3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.67□□□□□ -0.06
Trav3-3Q5R1C3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav3-3Q5R1C3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trav3-3Q5R1C3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3-3Q5R1C3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav3-3Q5R1C3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3-3Q5R1C3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3-3Q5R1C3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav3-3Q5R1C3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav3-3Q5R1C3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3-3Q5R1C3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.66□□□□□ -0.06
Trav3-3Q5R1C3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3-3Q5R1C3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3-3Q5R1C3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3-3Q5R1C3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3-3Q5R1C3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav3-3Q5R1C3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3-3Q5R1C3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav3-3Q5R1C3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3-3Q5R1C3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3-3Q5R1C3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Trav3-3Q5R1C3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3-3Q5R1C3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav3-3Q5R1C3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav3-3Q5R1C3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3-3Q5R1C3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav3-3Q5R1C3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC14.65□□□□□ -0.06
Trav3-3Q5R1C3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav3-3Q5R1C3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3-3Q5R1C3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3-3Q5R1C3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav3-3Q5R1C3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trav3-3Q5R1C3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-3Q5R1C3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-3Q5R1C3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-3Q5R1C3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-3Q5R1C3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav3-3Q5R1C3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-3Q5R1C3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav3-3Q5R1C3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-3Q5R1C3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav3-3Q5R1C3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav3-3Q5R1C3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav3-3Q5R1C3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.64□□□□□ -0.07
Trav3-3Q5R1C3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-3Q5R1C3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-3Q5R1C3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav3-3Q5R1C3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-3Q5R1C3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3-3Q5R1C3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms