Protein–RNA interactions for Protein: Q4ZGD9

Nxf3, Nuclear RNA export factor 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nxf3Q4ZGD9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nxf3Q4ZGD9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nxf3Q4ZGD9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Nxf3Q4ZGD9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nxf3Q4ZGD9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nxf3Q4ZGD9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nxf3Q4ZGD9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nxf3Q4ZGD9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nxf3Q4ZGD9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nxf3Q4ZGD9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nxf3Q4ZGD9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nxf3Q4ZGD9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nxf3Q4ZGD9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Nxf3Q4ZGD9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nxf3Q4ZGD9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.36■□□□□ 0.53
Nxf3Q4ZGD9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nxf3Q4ZGD9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nxf3Q4ZGD9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Nxf3Q4ZGD9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Nxf3Q4ZGD9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nxf3Q4ZGD9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nxf3Q4ZGD9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nxf3Q4ZGD9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nxf3Q4ZGD9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nxf3Q4ZGD9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nxf3Q4ZGD9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nxf3Q4ZGD9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nxf3Q4ZGD9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nxf3Q4ZGD9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nxf3Q4ZGD9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nxf3Q4ZGD9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Nxf3Q4ZGD9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nxf3Q4ZGD9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Nxf3Q4ZGD9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nxf3Q4ZGD9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nxf3Q4ZGD9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nxf3Q4ZGD9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nxf3Q4ZGD9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nxf3Q4ZGD9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nxf3Q4ZGD9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nxf3Q4ZGD9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nxf3Q4ZGD9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.34■□□□□ 0.53
Nxf3Q4ZGD9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.34■□□□□ 0.53
Nxf3Q4ZGD9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.34■□□□□ 0.53
Nxf3Q4ZGD9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.34■□□□□ 0.53
Nxf3Q4ZGD9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nxf3Q4ZGD9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nxf3Q4ZGD9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nxf3Q4ZGD9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nxf3Q4ZGD9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nxf3Q4ZGD9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nxf3Q4ZGD9 Etf1-202ENSMUST00000180351 108 ntBASIC18.33■□□□□ 0.52
Nxf3Q4ZGD9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nxf3Q4ZGD9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nxf3Q4ZGD9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Nxf3Q4ZGD9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Nxf3Q4ZGD9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nxf3Q4ZGD9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nxf3Q4ZGD9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nxf3Q4ZGD9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Nxf3Q4ZGD9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.32■□□□□ 0.52
Nxf3Q4ZGD9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Nxf3Q4ZGD9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Nxf3Q4ZGD9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.32■□□□□ 0.52
Nxf3Q4ZGD9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Nxf3Q4ZGD9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nxf3Q4ZGD9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nxf3Q4ZGD9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nxf3Q4ZGD9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.32■□□□□ 0.52
Nxf3Q4ZGD9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nxf3Q4ZGD9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Nxf3Q4ZGD9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nxf3Q4ZGD9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Nxf3Q4ZGD9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nxf3Q4ZGD9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nxf3Q4ZGD9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nxf3Q4ZGD9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.31■□□□□ 0.52
Nxf3Q4ZGD9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
Nxf3Q4ZGD9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nxf3Q4ZGD9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nxf3Q4ZGD9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nxf3Q4ZGD9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.3■□□□□ 0.52
Nxf3Q4ZGD9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Nxf3Q4ZGD9 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.3■□□□□ 0.52
Nxf3Q4ZGD9 Gm15820-201ENSMUST00000201566 728 ntBASIC18.3■□□□□ 0.52
Nxf3Q4ZGD9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nxf3Q4ZGD9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nxf3Q4ZGD9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.3■□□□□ 0.52
Nxf3Q4ZGD9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nxf3Q4ZGD9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nxf3Q4ZGD9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nxf3Q4ZGD9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nxf3Q4ZGD9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nxf3Q4ZGD9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nxf3Q4ZGD9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nxf3Q4ZGD9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nxf3Q4ZGD9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nxf3Q4ZGD9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nxf3Q4ZGD9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nxf3Q4ZGD9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms