Protein–RNA interactions for Protein: Q3V009

Tmed1, Transmembrane emp24 domain-containing protein 1, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmed1Q3V009 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Tmed1Q3V009 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tmed1Q3V009 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tmed1Q3V009 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Tmed1Q3V009 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tmed1Q3V009 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tmed1Q3V009 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tmed1Q3V009 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Tmed1Q3V009 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tmed1Q3V009 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Tmed1Q3V009 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tmed1Q3V009 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.19■□□□□ 0.66
Tmed1Q3V009 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tmed1Q3V009 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tmed1Q3V009 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tmed1Q3V009 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tmed1Q3V009 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tmed1Q3V009 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tmed1Q3V009 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tmed1Q3V009 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.18■□□□□ 0.66
Tmed1Q3V009 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tmed1Q3V009 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tmed1Q3V009 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tmed1Q3V009 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Tmed1Q3V009 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tmed1Q3V009 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.18■□□□□ 0.66
Tmed1Q3V009 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.18■□□□□ 0.66
Tmed1Q3V009 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tmed1Q3V009 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tmed1Q3V009 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Tmed1Q3V009 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tmed1Q3V009 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Tmed1Q3V009 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.17■□□□□ 0.66
Tmed1Q3V009 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.17■□□□□ 0.66
Tmed1Q3V009 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tmed1Q3V009 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tmed1Q3V009 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tmed1Q3V009 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tmed1Q3V009 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.17■□□□□ 0.66
Tmed1Q3V009 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tmed1Q3V009 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmed1Q3V009 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmed1Q3V009 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmed1Q3V009 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.16■□□□□ 0.66
Tmed1Q3V009 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmed1Q3V009 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmed1Q3V009 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tmed1Q3V009 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmed1Q3V009 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmed1Q3V009 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tmed1Q3V009 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmed1Q3V009 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Tmed1Q3V009 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmed1Q3V009 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmed1Q3V009 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmed1Q3V009 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.15■□□□□ 0.66
Tmed1Q3V009 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmed1Q3V009 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmed1Q3V009 Gm10232-201ENSMUST00000089221 720 ntBASIC19.15■□□□□ 0.66
Tmed1Q3V009 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmed1Q3V009 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Tmed1Q3V009 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmed1Q3V009 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmed1Q3V009 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmed1Q3V009 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmed1Q3V009 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Tmed1Q3V009 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tmed1Q3V009 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tmed1Q3V009 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Tmed1Q3V009 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tmed1Q3V009 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Tmed1Q3V009 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tmed1Q3V009 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tmed1Q3V009 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tmed1Q3V009 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tmed1Q3V009 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.14■□□□□ 0.65
Tmed1Q3V009 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Tmed1Q3V009 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tmed1Q3V009 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tmed1Q3V009 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tmed1Q3V009 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tmed1Q3V009 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tmed1Q3V009 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tmed1Q3V009 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tmed1Q3V009 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tmed1Q3V009 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tmed1Q3V009 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tmed1Q3V009 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Tmed1Q3V009 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.13■□□□□ 0.65
Tmed1Q3V009 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.13■□□□□ 0.65
Tmed1Q3V009 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tmed1Q3V009 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.13■□□□□ 0.65
Tmed1Q3V009 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tmed1Q3V009 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
Tmed1Q3V009 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tmed1Q3V009 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tmed1Q3V009 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Tmed1Q3V009 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.12■□□□□ 0.65
Tmed1Q3V009 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.12■□□□□ 0.65
Tmed1Q3V009 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms