Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
Fndc4Q3TR08 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fndc4Q3TR08 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fndc4Q3TR08 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fndc4Q3TR08 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Fndc4Q3TR08 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fndc4Q3TR08 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fndc4Q3TR08 Gm45102-201ENSMUST00000207427 857 ntBASIC16.63■□□□□ 0.25
Fndc4Q3TR08 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.63■□□□□ 0.25
Fndc4Q3TR08 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fndc4Q3TR08 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fndc4Q3TR08 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Fndc4Q3TR08 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fndc4Q3TR08 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Fndc4Q3TR08 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fndc4Q3TR08 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.62■□□□□ 0.25
Fndc4Q3TR08 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fndc4Q3TR08 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.62■□□□□ 0.25
Fndc4Q3TR08 Golph3-205ENSMUST00000228671 2842 ntBASIC16.62■□□□□ 0.25
Fndc4Q3TR08 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fndc4Q3TR08 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Fndc4Q3TR08 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fndc4Q3TR08 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fndc4Q3TR08 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.62■□□□□ 0.25
Fndc4Q3TR08 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.62■□□□□ 0.25
Fndc4Q3TR08 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.62■□□□□ 0.25
Fndc4Q3TR08 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fndc4Q3TR08 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Fndc4Q3TR08 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.62■□□□□ 0.25
Fndc4Q3TR08 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fndc4Q3TR08 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fndc4Q3TR08 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.61■□□□□ 0.25
Fndc4Q3TR08 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Fndc4Q3TR08 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fndc4Q3TR08 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Fndc4Q3TR08 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Fndc4Q3TR08 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Fndc4Q3TR08 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fndc4Q3TR08 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fndc4Q3TR08 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fndc4Q3TR08 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fndc4Q3TR08 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Fndc4Q3TR08 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fndc4Q3TR08 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Fndc4Q3TR08 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fndc4Q3TR08 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Fndc4Q3TR08 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.6■□□□□ 0.25
Fndc4Q3TR08 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.6■□□□□ 0.25
Fndc4Q3TR08 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Fndc4Q3TR08 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fndc4Q3TR08 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fndc4Q3TR08 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fndc4Q3TR08 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fndc4Q3TR08 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fndc4Q3TR08 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Fndc4Q3TR08 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fndc4Q3TR08 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fndc4Q3TR08 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Fndc4Q3TR08 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.6■□□□□ 0.25
Fndc4Q3TR08 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.6■□□□□ 0.25
Fndc4Q3TR08 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Fndc4Q3TR08 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fndc4Q3TR08 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fndc4Q3TR08 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Fndc4Q3TR08 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Fndc4Q3TR08 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fndc4Q3TR08 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Fndc4Q3TR08 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fndc4Q3TR08 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Fndc4Q3TR08 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fndc4Q3TR08 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fndc4Q3TR08 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fndc4Q3TR08 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fndc4Q3TR08 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Fndc4Q3TR08 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Fndc4Q3TR08 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fndc4Q3TR08 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.59■□□□□ 0.25
Fndc4Q3TR08 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fndc4Q3TR08 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Fndc4Q3TR08 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Fndc4Q3TR08 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Fndc4Q3TR08 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Fndc4Q3TR08 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Fndc4Q3TR08 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.58■□□□□ 0.24
Fndc4Q3TR08 Gm14117-201ENSMUST00000122417 843 ntBASIC16.58■□□□□ 0.24
Fndc4Q3TR08 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.58■□□□□ 0.24
Fndc4Q3TR08 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.58■□□□□ 0.24
Fndc4Q3TR08 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fndc4Q3TR08 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fndc4Q3TR08 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fndc4Q3TR08 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.58■□□□□ 0.24
Fndc4Q3TR08 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fndc4Q3TR08 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fndc4Q3TR08 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fndc4Q3TR08 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fndc4Q3TR08 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Fndc4Q3TR08 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Fndc4Q3TR08 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Fndc4Q3TR08 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Fndc4Q3TR08 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms