Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hspg2Q05793 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hspg2Q05793 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hspg2Q05793 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hspg2Q05793 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Hspg2Q05793 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.73□□□□□ -0.05
Hspg2Q05793 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hspg2Q05793 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.73□□□□□ -0.05
Hspg2Q05793 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.73□□□□□ -0.05
Hspg2Q05793 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hspg2Q05793 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hspg2Q05793 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hspg2Q05793 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hspg2Q05793 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hspg2Q05793 Gm10812-201ENSMUST00000099864 546 ntBASIC14.72□□□□□ -0.05
Hspg2Q05793 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hspg2Q05793 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.72□□□□□ -0.05
Hspg2Q05793 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hspg2Q05793 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Hspg2Q05793 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hspg2Q05793 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hspg2Q05793 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hspg2Q05793 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hspg2Q05793 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hspg2Q05793 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hspg2Q05793 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Hspg2Q05793 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Hspg2Q05793 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hspg2Q05793 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hspg2Q05793 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
Hspg2Q05793 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hspg2Q05793 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Hspg2Q05793 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hspg2Q05793 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Hspg2Q05793 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hspg2Q05793 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hspg2Q05793 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.7□□□□□ -0.06
Hspg2Q05793 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hspg2Q05793 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hspg2Q05793 Gm6420-201ENSMUST00000193885 723 ntBASIC14.7□□□□□ -0.06
Hspg2Q05793 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hspg2Q05793 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Hspg2Q05793 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Hspg2Q05793 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hspg2Q05793 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hspg2Q05793 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hspg2Q05793 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Hspg2Q05793 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hspg2Q05793 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hspg2Q05793 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hspg2Q05793 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hspg2Q05793 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hspg2Q05793 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hspg2Q05793 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.69□□□□□ -0.06
Hspg2Q05793 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hspg2Q05793 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Hspg2Q05793 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hspg2Q05793 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hspg2Q05793 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Hspg2Q05793 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hspg2Q05793 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hspg2Q05793 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hspg2Q05793 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hspg2Q05793 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.68□□□□□ -0.06
Hspg2Q05793 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hspg2Q05793 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hspg2Q05793 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hspg2Q05793 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC14.68□□□□□ -0.06
Hspg2Q05793 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hspg2Q05793 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hspg2Q05793 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hspg2Q05793 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.67□□□□□ -0.06
Hspg2Q05793 Gm26524-201ENSMUST00000192339 390 ntBASIC14.67□□□□□ -0.06
Hspg2Q05793 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.67□□□□□ -0.06
Hspg2Q05793 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.67□□□□□ -0.06
Hspg2Q05793 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hspg2Q05793 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Hspg2Q05793 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Hspg2Q05793 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hspg2Q05793 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Hspg2Q05793 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hspg2Q05793 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hspg2Q05793 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hspg2Q05793 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hspg2Q05793 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hspg2Q05793 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hspg2Q05793 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hspg2Q05793 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.66□□□□□ -0.06
Hspg2Q05793 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hspg2Q05793 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.66□□□□□ -0.06
Hspg2Q05793 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.66□□□□□ -0.06
Hspg2Q05793 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hspg2Q05793 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.66□□□□□ -0.06
Hspg2Q05793 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hspg2Q05793 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hspg2Q05793 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Hspg2Q05793 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Hspg2Q05793 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.66□□□□□ -0.06
Hspg2Q05793 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hspg2Q05793 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms