Protein–RNA interactions for Protein: P97454

Smad5, Mothers against decapentaplegic homolog 5, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad5P97454 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smad5P97454 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Smad5P97454 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smad5P97454 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smad5P97454 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
Smad5P97454 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smad5P97454 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smad5P97454 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smad5P97454 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Smad5P97454 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smad5P97454 Gm26833-201ENSMUST00000180899 440 ntBASIC18.56■□□□□ 0.56
Smad5P97454 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smad5P97454 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smad5P97454 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Smad5P97454 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smad5P97454 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smad5P97454 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smad5P97454 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Smad5P97454 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smad5P97454 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smad5P97454 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smad5P97454 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Smad5P97454 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smad5P97454 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Smad5P97454 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smad5P97454 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.55■□□□□ 0.56
Smad5P97454 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smad5P97454 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smad5P97454 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smad5P97454 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smad5P97454 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smad5P97454 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.55■□□□□ 0.56
Smad5P97454 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Smad5P97454 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smad5P97454 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smad5P97454 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smad5P97454 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smad5P97454 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Smad5P97454 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smad5P97454 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smad5P97454 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smad5P97454 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smad5P97454 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smad5P97454 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smad5P97454 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Smad5P97454 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Smad5P97454 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smad5P97454 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smad5P97454 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smad5P97454 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smad5P97454 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smad5P97454 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smad5P97454 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smad5P97454 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smad5P97454 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Smad5P97454 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smad5P97454 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smad5P97454 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.52■□□□□ 0.56
Smad5P97454 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.52■□□□□ 0.56
Smad5P97454 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.52■□□□□ 0.56
Smad5P97454 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smad5P97454 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smad5P97454 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Smad5P97454 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smad5P97454 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smad5P97454 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smad5P97454 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smad5P97454 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Smad5P97454 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Smad5P97454 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smad5P97454 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smad5P97454 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smad5P97454 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smad5P97454 Gm43060-201ENSMUST00000200621 289 ntBASIC18.51■□□□□ 0.55
Smad5P97454 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.51■□□□□ 0.55
Smad5P97454 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smad5P97454 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smad5P97454 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smad5P97454 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.51■□□□□ 0.55
Smad5P97454 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smad5P97454 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smad5P97454 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smad5P97454 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smad5P97454 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smad5P97454 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smad5P97454 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smad5P97454 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smad5P97454 Gm10493-201ENSMUST00000097270 612 ntBASIC18.5■□□□□ 0.55
Smad5P97454 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smad5P97454 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Smad5P97454 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smad5P97454 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smad5P97454 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smad5P97454 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smad5P97454 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Smad5P97454 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smad5P97454 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smad5P97454 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smad5P97454 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smad5P97454 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms