Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.32■□□□□ 0.68
Crnkl1P63154 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.32■□□□□ 0.68
Crnkl1P63154 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Crnkl1P63154 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.32■□□□□ 0.68
Crnkl1P63154 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.32■□□□□ 0.68
Crnkl1P63154 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Crnkl1P63154 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Crnkl1P63154 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Crnkl1P63154 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.31■□□□□ 0.68
Crnkl1P63154 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Crnkl1P63154 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Crnkl1P63154 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Crnkl1P63154 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Crnkl1P63154 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.31■□□□□ 0.68
Crnkl1P63154 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.31■□□□□ 0.68
Crnkl1P63154 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Crnkl1P63154 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Crnkl1P63154 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Crnkl1P63154 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Crnkl1P63154 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Crnkl1P63154 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Crnkl1P63154 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Crnkl1P63154 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Crnkl1P63154 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Crnkl1P63154 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Crnkl1P63154 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Crnkl1P63154 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Crnkl1P63154 Gm15546-201ENSMUST00000122095 826 ntBASIC19.3■□□□□ 0.68
Crnkl1P63154 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Crnkl1P63154 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.3■□□□□ 0.68
Crnkl1P63154 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Crnkl1P63154 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Crnkl1P63154 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Crnkl1P63154 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Crnkl1P63154 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Crnkl1P63154 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Crnkl1P63154 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Crnkl1P63154 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Crnkl1P63154 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Crnkl1P63154 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Crnkl1P63154 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Crnkl1P63154 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Crnkl1P63154 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Crnkl1P63154 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.29■□□□□ 0.68
Crnkl1P63154 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Crnkl1P63154 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Crnkl1P63154 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Crnkl1P63154 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.28■□□□□ 0.68
Crnkl1P63154 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Crnkl1P63154 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Crnkl1P63154 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Crnkl1P63154 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Crnkl1P63154 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.28■□□□□ 0.68
Crnkl1P63154 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Crnkl1P63154 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Crnkl1P63154 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Crnkl1P63154 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Crnkl1P63154 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Crnkl1P63154 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Crnkl1P63154 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Crnkl1P63154 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Crnkl1P63154 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Crnkl1P63154 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Crnkl1P63154 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
Crnkl1P63154 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.27■□□□□ 0.68
Crnkl1P63154 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Crnkl1P63154 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Crnkl1P63154 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Crnkl1P63154 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Crnkl1P63154 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.27■□□□□ 0.68
Crnkl1P63154 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.27■□□□□ 0.68
Crnkl1P63154 Rarb-207ENSMUST00000225921 2756 ntBASIC19.27■□□□□ 0.68
Crnkl1P63154 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Crnkl1P63154 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Crnkl1P63154 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Crnkl1P63154 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
Crnkl1P63154 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Crnkl1P63154 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Crnkl1P63154 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Crnkl1P63154 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Crnkl1P63154 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Crnkl1P63154 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Crnkl1P63154 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.26■□□□□ 0.67
Crnkl1P63154 Gm15820-201ENSMUST00000201566 728 ntBASIC19.26■□□□□ 0.67
Crnkl1P63154 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Crnkl1P63154 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Crnkl1P63154 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Crnkl1P63154 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Crnkl1P63154 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Crnkl1P63154 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Crnkl1P63154 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Crnkl1P63154 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Crnkl1P63154 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Crnkl1P63154 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Crnkl1P63154 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.25■□□□□ 0.67
Crnkl1P63154 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Crnkl1P63154 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Crnkl1P63154 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.25■□□□□ 0.67
Crnkl1P63154 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Crnkl1P63154 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms