Protein–RNA interactions for Protein: P61809

Cdk5r1, Cyclin-dependent kinase 5 activator 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5r1P61809 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5r1P61809 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.37■□□□□ 0.37
Cdk5r1P61809 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5r1P61809 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5r1P61809 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cdk5r1P61809 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5r1P61809 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.37■□□□□ 0.37
Cdk5r1P61809 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5r1P61809 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cdk5r1P61809 Gm15546-201ENSMUST00000122095 826 ntBASIC17.36■□□□□ 0.37
Cdk5r1P61809 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5r1P61809 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5r1P61809 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5r1P61809 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5r1P61809 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5r1P61809 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5r1P61809 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5r1P61809 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5r1P61809 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5r1P61809 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cdk5r1P61809 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.36■□□□□ 0.37
Cdk5r1P61809 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.36■□□□□ 0.37
Cdk5r1P61809 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cdk5r1P61809 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdk5r1P61809 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdk5r1P61809 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdk5r1P61809 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cdk5r1P61809 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cdk5r1P61809 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cdk5r1P61809 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk5r1P61809 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Cdk5r1P61809 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.34■□□□□ 0.37
Cdk5r1P61809 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.34■□□□□ 0.37
Cdk5r1P61809 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk5r1P61809 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cdk5r1P61809 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk5r1P61809 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk5r1P61809 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk5r1P61809 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cdk5r1P61809 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.34■□□□□ 0.37
Cdk5r1P61809 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk5r1P61809 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk5r1P61809 Golph3-205ENSMUST00000228671 2842 ntBASIC17.34■□□□□ 0.37
Cdk5r1P61809 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cdk5r1P61809 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdk5r1P61809 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Cdk5r1P61809 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdk5r1P61809 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cdk5r1P61809 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdk5r1P61809 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdk5r1P61809 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdk5r1P61809 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.33■□□□□ 0.36
Cdk5r1P61809 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdk5r1P61809 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cdk5r1P61809 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cdk5r1P61809 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk5r1P61809 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk5r1P61809 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk5r1P61809 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk5r1P61809 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.32■□□□□ 0.36
Cdk5r1P61809 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Cdk5r1P61809 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk5r1P61809 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk5r1P61809 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk5r1P61809 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk5r1P61809 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cdk5r1P61809 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.32■□□□□ 0.36
Cdk5r1P61809 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Cdk5r1P61809 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cdk5r1P61809 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdk5r1P61809 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdk5r1P61809 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
Cdk5r1P61809 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.31■□□□□ 0.36
Cdk5r1P61809 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Cdk5r1P61809 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdk5r1P61809 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdk5r1P61809 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cdk5r1P61809 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.3■□□□□ 0.36
Cdk5r1P61809 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk5r1P61809 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk5r1P61809 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cdk5r1P61809 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.3■□□□□ 0.36
Cdk5r1P61809 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk5r1P61809 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk5r1P61809 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cdk5r1P61809 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk5r1P61809 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk5r1P61809 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk5r1P61809 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdk5r1P61809 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.29■□□□□ 0.36
Cdk5r1P61809 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cdk5r1P61809 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5r1P61809 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5r1P61809 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5r1P61809 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5r1P61809 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5r1P61809 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5r1P61809 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5r1P61809 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdk5r1P61809 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms