Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.21■□□□□ 0.19
Abca1P41233 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Abca1P41233 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.21■□□□□ 0.19
Abca1P41233 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Abca1P41233 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Abca1P41233 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Abca1P41233 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Abca1P41233 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.2■□□□□ 0.18
Abca1P41233 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Abca1P41233 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.2■□□□□ 0.18
Abca1P41233 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Abca1P41233 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Abca1P41233 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.2■□□□□ 0.18
Abca1P41233 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Abca1P41233 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Abca1P41233 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Abca1P41233 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Abca1P41233 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Abca1P41233 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Abca1P41233 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Abca1P41233 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.19■□□□□ 0.18
Abca1P41233 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Abca1P41233 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Abca1P41233 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Abca1P41233 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Abca1P41233 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Abca1P41233 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Abca1P41233 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Abca1P41233 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Abca1P41233 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Abca1P41233 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Abca1P41233 Reep4-203ENSMUST00000226563 1444 ntBASIC16.19■□□□□ 0.18
Abca1P41233 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Abca1P41233 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Abca1P41233 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Abca1P41233 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Abca1P41233 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Abca1P41233 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Abca1P41233 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Abca1P41233 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca1P41233 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca1P41233 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca1P41233 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Abca1P41233 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.18■□□□□ 0.18
Abca1P41233 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca1P41233 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Abca1P41233 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca1P41233 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca1P41233 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.18■□□□□ 0.18
Abca1P41233 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.18■□□□□ 0.18
Abca1P41233 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca1P41233 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca1P41233 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Abca1P41233 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.18■□□□□ 0.18
Abca1P41233 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca1P41233 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca1P41233 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Abca1P41233 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Abca1P41233 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.18■□□□□ 0.18
Abca1P41233 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca1P41233 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Abca1P41233 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Abca1P41233 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.17■□□□□ 0.18
Abca1P41233 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Abca1P41233 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Abca1P41233 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Abca1P41233 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Abca1P41233 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Abca1P41233 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.17■□□□□ 0.18
Abca1P41233 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.17■□□□□ 0.18
Abca1P41233 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Abca1P41233 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.17■□□□□ 0.18
Abca1P41233 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.17■□□□□ 0.18
Abca1P41233 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Abca1P41233 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Abca1P41233 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Abca1P41233 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Abca1P41233 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Abca1P41233 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Abca1P41233 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Abca1P41233 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abca1P41233 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Abca1P41233 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.16■□□□□ 0.18
Abca1P41233 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Abca1P41233 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abca1P41233 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abca1P41233 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abca1P41233 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abca1P41233 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Abca1P41233 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Abca1P41233 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Abca1P41233 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abca1P41233 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abca1P41233 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Abca1P41233 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.15■□□□□ 0.18
Abca1P41233 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Abca1P41233 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Abca1P41233 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Abca1P41233 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.15■□□□□ 0.18
Abca1P41233 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms