Protein–RNA interactions for Protein: P22605

Rarb, Retinoic acid receptor beta, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RarbP22605 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RarbP22605 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RarbP22605 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.81■■□□□ 1.08
RarbP22605 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.81■■□□□ 1.08
RarbP22605 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RarbP22605 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RarbP22605 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RarbP22605 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RarbP22605 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.8■■□□□ 1.08
RarbP22605 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.8■■□□□ 1.08
RarbP22605 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
RarbP22605 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RarbP22605 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
RarbP22605 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RarbP22605 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RarbP22605 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RarbP22605 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.79■■□□□ 1.08
RarbP22605 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RarbP22605 Gm10653-202ENSMUST00000139570 835 ntBASIC21.79■■□□□ 1.08
RarbP22605 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.79■■□□□ 1.08
RarbP22605 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RarbP22605 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RarbP22605 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RarbP22605 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RarbP22605 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RarbP22605 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RarbP22605 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.78■■□□□ 1.08
RarbP22605 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RarbP22605 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.78■■□□□ 1.08
RarbP22605 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RarbP22605 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RarbP22605 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RarbP22605 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RarbP22605 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RarbP22605 Gm4968-201ENSMUST00000071458 858 ntBASIC21.77■■□□□ 1.08
RarbP22605 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.77■■□□□ 1.08
RarbP22605 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RarbP22605 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.77■■□□□ 1.07
RarbP22605 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RarbP22605 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RarbP22605 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RarbP22605 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RarbP22605 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RarbP22605 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RarbP22605 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RarbP22605 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RarbP22605 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RarbP22605 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
RarbP22605 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RarbP22605 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.75■■□□□ 1.07
RarbP22605 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RarbP22605 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RarbP22605 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RarbP22605 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RarbP22605 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RarbP22605 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RarbP22605 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RarbP22605 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RarbP22605 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RarbP22605 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RarbP22605 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RarbP22605 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RarbP22605 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
RarbP22605 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RarbP22605 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RarbP22605 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RarbP22605 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RarbP22605 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.73■■□□□ 1.07
RarbP22605 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RarbP22605 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RarbP22605 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RarbP22605 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RarbP22605 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.72■■□□□ 1.07
RarbP22605 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RarbP22605 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
RarbP22605 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.72■■□□□ 1.07
RarbP22605 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
RarbP22605 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RarbP22605 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RarbP22605 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RarbP22605 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RarbP22605 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.71■■□□□ 1.07
RarbP22605 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RarbP22605 Gm20760-201ENSMUST00000179197 648 ntBASIC21.71■■□□□ 1.07
RarbP22605 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
RarbP22605 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.71■■□□□ 1.07
RarbP22605 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.71■■□□□ 1.07
RarbP22605 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RarbP22605 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.71■■□□□ 1.07
RarbP22605 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RarbP22605 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RarbP22605 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RarbP22605 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RarbP22605 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RarbP22605 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RarbP22605 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RarbP22605 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RarbP22605 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RarbP22605 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RarbP22605 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms