Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BdnfP21237 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
BdnfP21237 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BdnfP21237 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BdnfP21237 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BdnfP21237 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BdnfP21237 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
BdnfP21237 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BdnfP21237 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BdnfP21237 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BdnfP21237 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
BdnfP21237 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BdnfP21237 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.74■□□□□ 0.59
BdnfP21237 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.74■□□□□ 0.59
BdnfP21237 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BdnfP21237 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BdnfP21237 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BdnfP21237 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BdnfP21237 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
BdnfP21237 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BdnfP21237 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
BdnfP21237 Gm7417-201ENSMUST00000192950 473 ntBASIC18.73■□□□□ 0.59
BdnfP21237 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BdnfP21237 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BdnfP21237 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BdnfP21237 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
BdnfP21237 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
BdnfP21237 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
BdnfP21237 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BdnfP21237 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.72■□□□□ 0.59
BdnfP21237 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.72■□□□□ 0.59
BdnfP21237 Etf1-202ENSMUST00000180351 108 ntBASIC18.72■□□□□ 0.59
BdnfP21237 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.72■□□□□ 0.59
BdnfP21237 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BdnfP21237 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BdnfP21237 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
BdnfP21237 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
BdnfP21237 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
BdnfP21237 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
BdnfP21237 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BdnfP21237 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
BdnfP21237 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BdnfP21237 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BdnfP21237 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BdnfP21237 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
BdnfP21237 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BdnfP21237 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BdnfP21237 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BdnfP21237 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.71■□□□□ 0.59
BdnfP21237 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BdnfP21237 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BdnfP21237 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
BdnfP21237 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BdnfP21237 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.7■□□□□ 0.58
BdnfP21237 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BdnfP21237 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BdnfP21237 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
BdnfP21237 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
BdnfP21237 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
BdnfP21237 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BdnfP21237 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BdnfP21237 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
BdnfP21237 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BdnfP21237 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BdnfP21237 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BdnfP21237 Gm9959-201ENSMUST00000068277 390 ntBASIC18.69■□□□□ 0.58
BdnfP21237 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
BdnfP21237 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BdnfP21237 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.69■□□□□ 0.58
BdnfP21237 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.68■□□□□ 0.58
BdnfP21237 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BdnfP21237 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
BdnfP21237 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.68■□□□□ 0.58
BdnfP21237 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BdnfP21237 Gm9870-201ENSMUST00000063874 645 ntBASIC18.68■□□□□ 0.58
BdnfP21237 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
BdnfP21237 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BdnfP21237 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.68■□□□□ 0.58
BdnfP21237 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.68■□□□□ 0.58
BdnfP21237 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.68■□□□□ 0.58
BdnfP21237 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
BdnfP21237 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BdnfP21237 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BdnfP21237 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BdnfP21237 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BdnfP21237 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.67■□□□□ 0.58
BdnfP21237 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
BdnfP21237 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.67■□□□□ 0.58
BdnfP21237 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BdnfP21237 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BdnfP21237 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
BdnfP21237 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.67■□□□□ 0.58
BdnfP21237 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
BdnfP21237 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
BdnfP21237 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BdnfP21237 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BdnfP21237 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BdnfP21237 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BdnfP21237 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BdnfP21237 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms