Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn1P18608 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn1P18608 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn1P18608 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn1P18608 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hmgn1P18608 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Hmgn1P18608 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn1P18608 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn1P18608 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn1P18608 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn1P18608 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Hmgn1P18608 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn1P18608 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn1P18608 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.95■□□□□ 0.46
Hmgn1P18608 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn1P18608 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn1P18608 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Hmgn1P18608 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn1P18608 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn1P18608 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn1P18608 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Hmgn1P18608 Golph3-205ENSMUST00000228671 2842 ntBASIC17.94■□□□□ 0.46
Hmgn1P18608 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Hmgn1P18608 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.94■□□□□ 0.46
Hmgn1P18608 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn1P18608 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn1P18608 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgn1P18608 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Hmgn1P18608 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.93■□□□□ 0.46
Hmgn1P18608 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgn1P18608 Gm5921-201ENSMUST00000075898 882 ntBASIC17.93■□□□□ 0.46
Hmgn1P18608 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgn1P18608 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn1P18608 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn1P18608 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Hmgn1P18608 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn1P18608 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn1P18608 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn1P18608 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn1P18608 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn1P18608 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Hmgn1P18608 Gm43530-201ENSMUST00000195920 274 ntBASIC17.92■□□□□ 0.46
Hmgn1P18608 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn1P18608 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.92■□□□□ 0.46
Hmgn1P18608 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn1P18608 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn1P18608 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn1P18608 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn1P18608 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn1P18608 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn1P18608 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn1P18608 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Hmgn1P18608 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Hmgn1P18608 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Hmgn1P18608 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn1P18608 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn1P18608 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Hmgn1P18608 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn1P18608 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
Hmgn1P18608 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn1P18608 Gm40881-201ENSMUST00000223397 166 ntBASIC17.9■□□□□ 0.46
Hmgn1P18608 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.9■□□□□ 0.46
Hmgn1P18608 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn1P18608 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn1P18608 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn1P18608 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn1P18608 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn1P18608 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Hmgn1P18608 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Hmgn1P18608 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn1P18608 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Hmgn1P18608 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn1P18608 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn1P18608 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn1P18608 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Hmgn1P18608 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Hmgn1P18608 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn1P18608 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn1P18608 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn1P18608 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn1P18608 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn1P18608 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn1P18608 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn1P18608 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Hmgn1P18608 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Hmgn1P18608 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn1P18608 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn1P18608 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn1P18608 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Hmgn1P18608 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn1P18608 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Hmgn1P18608 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.88■□□□□ 0.45
Hmgn1P18608 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.88■□□□□ 0.45
Hmgn1P18608 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.88■□□□□ 0.45
Hmgn1P18608 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.88■□□□□ 0.45
Hmgn1P18608 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Hmgn1P18608 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Hmgn1P18608 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
Hmgn1P18608 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn1P18608 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms