Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
COL11A2P13942 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
COL11A2P13942 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
COL11A2P13942 KRT19P1-201ENST00000405746 1186 ntBASIC27.47■■□□□ 1.99
COL11A2P13942 APTR-205ENST00000447009 902 ntTSL 2 BASIC27.47■■□□□ 1.99
COL11A2P13942 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC27.47■■□□□ 1.99
COL11A2P13942 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC27.47■■□□□ 1.99
COL11A2P13942 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
COL11A2P13942 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
COL11A2P13942 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
COL11A2P13942 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
COL11A2P13942 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
COL11A2P13942 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
COL11A2P13942 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
COL11A2P13942 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
COL11A2P13942 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
COL11A2P13942 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC27.46■■□□□ 1.99
COL11A2P13942 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
COL11A2P13942 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
COL11A2P13942 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
COL11A2P13942 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
COL11A2P13942 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC27.46■■□□□ 1.99
COL11A2P13942 BX005040.4-201ENST00000637145 1518 ntBASIC27.46■■□□□ 1.99
COL11A2P13942 AC135731.1-201ENST00000569415 2548 ntBASIC27.45■■□□□ 1.99
COL11A2P13942 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
COL11A2P13942 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.98
COL11A2P13942 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC27.45■■□□□ 1.98
COL11A2P13942 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
COL11A2P13942 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
COL11A2P13942 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
COL11A2P13942 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
COL11A2P13942 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
COL11A2P13942 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
COL11A2P13942 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
COL11A2P13942 SMUG1P1-201ENST00000590640 811 ntBASIC27.44■■□□□ 1.98
COL11A2P13942 LINC01529-204ENST00000636474 1715 ntBASIC27.44■■□□□ 1.98
COL11A2P13942 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
COL11A2P13942 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
COL11A2P13942 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
COL11A2P13942 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
COL11A2P13942 SLC7A5P2-201ENST00000553010 536 ntBASIC27.43■■□□□ 1.98
COL11A2P13942 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC27.43■■□□□ 1.98
COL11A2P13942 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
COL11A2P13942 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
COL11A2P13942 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
COL11A2P13942 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
COL11A2P13942 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC27.42■■□□□ 1.98
COL11A2P13942 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC27.42■■□□□ 1.98
COL11A2P13942 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC27.41■■□□□ 1.98
COL11A2P13942 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
COL11A2P13942 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC27.41■■□□□ 1.98
COL11A2P13942 SPI1-203ENST00000533030 661 ntTSL 2 BASIC27.41■■□□□ 1.98
COL11A2P13942 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
COL11A2P13942 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
COL11A2P13942 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
COL11A2P13942 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
COL11A2P13942 AC022211.4-201ENST00000625094 2161 ntBASIC27.41■■□□□ 1.98
COL11A2P13942 AC142086.2-201ENST00000569753 217 ntBASIC27.41■■□□□ 1.98
COL11A2P13942 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
COL11A2P13942 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC27.41■■□□□ 1.98
COL11A2P13942 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
COL11A2P13942 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC27.4■■□□□ 1.98
COL11A2P13942 AC004687.1-201ENST00000579003 1625 ntBASIC27.4■■□□□ 1.98
COL11A2P13942 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
COL11A2P13942 AP003733.4-201ENST00000623785 1697 ntBASIC27.4■■□□□ 1.98
COL11A2P13942 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC27.4■■□□□ 1.98
COL11A2P13942 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC27.4■■□□□ 1.98
COL11A2P13942 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC27.4■■□□□ 1.98
COL11A2P13942 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
COL11A2P13942 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
COL11A2P13942 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
COL11A2P13942 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC27.39■■□□□ 1.98
COL11A2P13942 AC011767.1-201ENST00000617410 1153 ntBASIC27.39■■□□□ 1.98
COL11A2P13942 AC079630.1-202ENST00000618127 1840 ntBASIC27.39■■□□□ 1.98
COL11A2P13942 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
COL11A2P13942 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
COL11A2P13942 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.97
COL11A2P13942 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC27.38■■□□□ 1.97
COL11A2P13942 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC27.38■■□□□ 1.97
COL11A2P13942 MIR4651-201ENST00000582622 73 ntBASIC27.38■■□□□ 1.97
COL11A2P13942 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
COL11A2P13942 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC27.38■■□□□ 1.97
COL11A2P13942 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL11A2P13942 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL11A2P13942 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL11A2P13942 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
COL11A2P13942 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
COL11A2P13942 AC098934.4-201ENST00000564127 592 ntBASIC27.38■■□□□ 1.97
COL11A2P13942 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL11A2P13942 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
COL11A2P13942 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
COL11A2P13942 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
COL11A2P13942 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC27.37■■□□□ 1.97
COL11A2P13942 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC27.37■■□□□ 1.97
COL11A2P13942 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
COL11A2P13942 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC27.37■■□□□ 1.97
COL11A2P13942 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC27.37■■□□□ 1.97
COL11A2P13942 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC27.37■■□□□ 1.97
COL11A2P13942 METTL15-202ENST00000403099 795 ntTSL 5 BASIC27.37■■□□□ 1.97
COL11A2P13942 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC27.37■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms