Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CopeO89079 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CopeO89079 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CopeO89079 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CopeO89079 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CopeO89079 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CopeO89079 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.24■□□□□ 0.83
CopeO89079 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CopeO89079 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CopeO89079 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.23■□□□□ 0.83
CopeO89079 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CopeO89079 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CopeO89079 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CopeO89079 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CopeO89079 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CopeO89079 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CopeO89079 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CopeO89079 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CopeO89079 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CopeO89079 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CopeO89079 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CopeO89079 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CopeO89079 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CopeO89079 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CopeO89079 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CopeO89079 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.22■□□□□ 0.83
CopeO89079 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CopeO89079 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.21■□□□□ 0.83
CopeO89079 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CopeO89079 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CopeO89079 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CopeO89079 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.21■□□□□ 0.83
CopeO89079 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.21■□□□□ 0.83
CopeO89079 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CopeO89079 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CopeO89079 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CopeO89079 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CopeO89079 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CopeO89079 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CopeO89079 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CopeO89079 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CopeO89079 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.2■□□□□ 0.82
CopeO89079 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CopeO89079 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.2■□□□□ 0.82
CopeO89079 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CopeO89079 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.2■□□□□ 0.82
CopeO89079 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CopeO89079 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CopeO89079 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CopeO89079 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
CopeO89079 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CopeO89079 Gm43530-201ENSMUST00000195920 274 ntBASIC20.19■□□□□ 0.82
CopeO89079 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CopeO89079 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CopeO89079 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CopeO89079 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CopeO89079 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.18■□□□□ 0.82
CopeO89079 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CopeO89079 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
CopeO89079 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CopeO89079 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CopeO89079 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CopeO89079 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CopeO89079 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CopeO89079 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CopeO89079 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CopeO89079 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CopeO89079 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CopeO89079 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
CopeO89079 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CopeO89079 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CopeO89079 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CopeO89079 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CopeO89079 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CopeO89079 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CopeO89079 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CopeO89079 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CopeO89079 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CopeO89079 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.16■□□□□ 0.82
CopeO89079 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.16■□□□□ 0.82
CopeO89079 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CopeO89079 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CopeO89079 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CopeO89079 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CopeO89079 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CopeO89079 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CopeO89079 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CopeO89079 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CopeO89079 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CopeO89079 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.15■□□□□ 0.82
CopeO89079 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CopeO89079 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CopeO89079 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
CopeO89079 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
CopeO89079 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CopeO89079 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CopeO89079 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CopeO89079 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CopeO89079 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CopeO89079 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms