Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Matn4O89029 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Matn4O89029 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Matn4O89029 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Matn4O89029 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Matn4O89029 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Matn4O89029 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.56■□□□□ 0.56
Matn4O89029 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Matn4O89029 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Matn4O89029 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Matn4O89029 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Matn4O89029 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.56■□□□□ 0.56
Matn4O89029 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Matn4O89029 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Matn4O89029 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Matn4O89029 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.56■□□□□ 0.56
Matn4O89029 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Matn4O89029 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Matn4O89029 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Matn4O89029 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Matn4O89029 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Matn4O89029 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Matn4O89029 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Matn4O89029 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.55■□□□□ 0.56
Matn4O89029 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Matn4O89029 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Matn4O89029 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Matn4O89029 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Matn4O89029 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Matn4O89029 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Matn4O89029 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Matn4O89029 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Matn4O89029 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.54■□□□□ 0.56
Matn4O89029 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.54■□□□□ 0.56
Matn4O89029 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Matn4O89029 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.54■□□□□ 0.56
Matn4O89029 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.54■□□□□ 0.56
Matn4O89029 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Matn4O89029 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Matn4O89029 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Matn4O89029 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Matn4O89029 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Matn4O89029 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Matn4O89029 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.54■□□□□ 0.56
Matn4O89029 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Matn4O89029 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Matn4O89029 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Matn4O89029 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Matn4O89029 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Matn4O89029 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Matn4O89029 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Matn4O89029 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Matn4O89029 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Matn4O89029 Etf1-202ENSMUST00000180351 108 ntBASIC18.53■□□□□ 0.56
Matn4O89029 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Matn4O89029 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.53■□□□□ 0.56
Matn4O89029 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.53■□□□□ 0.56
Matn4O89029 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Matn4O89029 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Matn4O89029 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Matn4O89029 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Matn4O89029 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Matn4O89029 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Matn4O89029 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.52■□□□□ 0.56
Matn4O89029 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Matn4O89029 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Matn4O89029 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Matn4O89029 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Matn4O89029 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Matn4O89029 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Matn4O89029 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Matn4O89029 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Matn4O89029 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Matn4O89029 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Matn4O89029 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Matn4O89029 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Matn4O89029 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Matn4O89029 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Matn4O89029 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Matn4O89029 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.51■□□□□ 0.55
Matn4O89029 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Matn4O89029 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Matn4O89029 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Matn4O89029 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Matn4O89029 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Matn4O89029 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Matn4O89029 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Matn4O89029 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Matn4O89029 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Matn4O89029 AA386476-201ENSMUST00000098781 1665 ntBASIC18.5■□□□□ 0.55
Matn4O89029 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Matn4O89029 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Matn4O89029 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Matn4O89029 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Matn4O89029 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Matn4O89029 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Matn4O89029 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Matn4O89029 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.49■□□□□ 0.55
Matn4O89029 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Matn4O89029 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms