Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcd4O89016 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Abcd4O89016 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcd4O89016 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcd4O89016 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Abcd4O89016 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcd4O89016 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcd4O89016 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcd4O89016 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Abcd4O89016 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcd4O89016 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcd4O89016 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcd4O89016 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Abcd4O89016 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abcd4O89016 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Abcd4O89016 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.67■□□□□ 0.42
Abcd4O89016 Gm40848-201ENSMUST00000221998 324 ntBASIC17.67■□□□□ 0.42
Abcd4O89016 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.67■□□□□ 0.42
Abcd4O89016 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abcd4O89016 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abcd4O89016 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Abcd4O89016 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Abcd4O89016 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Abcd4O89016 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Abcd4O89016 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Abcd4O89016 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.66■□□□□ 0.42
Abcd4O89016 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Abcd4O89016 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Abcd4O89016 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Abcd4O89016 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Abcd4O89016 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Abcd4O89016 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Abcd4O89016 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abcd4O89016 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abcd4O89016 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.65■□□□□ 0.42
Abcd4O89016 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abcd4O89016 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
Abcd4O89016 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abcd4O89016 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abcd4O89016 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abcd4O89016 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Abcd4O89016 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Abcd4O89016 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Abcd4O89016 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abcd4O89016 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Abcd4O89016 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abcd4O89016 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.65■□□□□ 0.42
Abcd4O89016 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Abcd4O89016 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.65■□□□□ 0.42
Abcd4O89016 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
Abcd4O89016 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Abcd4O89016 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Abcd4O89016 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Abcd4O89016 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.64■□□□□ 0.41
Abcd4O89016 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.64■□□□□ 0.41
Abcd4O89016 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Abcd4O89016 Mir6236-201ENSMUST00000184437 123 ntBASIC17.64■□□□□ 0.41
Abcd4O89016 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Abcd4O89016 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.64■□□□□ 0.41
Abcd4O89016 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Abcd4O89016 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Abcd4O89016 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Abcd4O89016 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Abcd4O89016 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Abcd4O89016 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Abcd4O89016 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Abcd4O89016 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.63■□□□□ 0.41
Abcd4O89016 Smad6-203ENSMUST00000179458 273 ntBASIC17.63■□□□□ 0.41
Abcd4O89016 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.63■□□□□ 0.41
Abcd4O89016 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Abcd4O89016 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Abcd4O89016 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Abcd4O89016 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Abcd4O89016 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.63■□□□□ 0.41
Abcd4O89016 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.62■□□□□ 0.41
Abcd4O89016 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
Abcd4O89016 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcd4O89016 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcd4O89016 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Abcd4O89016 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Abcd4O89016 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcd4O89016 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Abcd4O89016 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.62■□□□□ 0.41
Abcd4O89016 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcd4O89016 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcd4O89016 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcd4O89016 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.61■□□□□ 0.41
Abcd4O89016 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Abcd4O89016 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.61■□□□□ 0.41
Abcd4O89016 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Abcd4O89016 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcd4O89016 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcd4O89016 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Abcd4O89016 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcd4O89016 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcd4O89016 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcd4O89016 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abcd4O89016 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abcd4O89016 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.6■□□□□ 0.41
Abcd4O89016 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms