Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc28a2O88627 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc28a2O88627 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc28a2O88627 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc28a2O88627 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.4■□□□□ 0.38
Slc28a2O88627 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc28a2O88627 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc28a2O88627 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Slc28a2O88627 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc28a2O88627 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc28a2O88627 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Slc28a2O88627 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc28a2O88627 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc28a2O88627 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc28a2O88627 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.39■□□□□ 0.38
Slc28a2O88627 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Slc28a2O88627 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Slc28a2O88627 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Slc28a2O88627 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slc28a2O88627 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc28a2O88627 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.39■□□□□ 0.37
Slc28a2O88627 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc28a2O88627 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc28a2O88627 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.39■□□□□ 0.37
Slc28a2O88627 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Slc28a2O88627 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc28a2O88627 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc28a2O88627 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc28a2O88627 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Slc28a2O88627 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slc28a2O88627 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Slc28a2O88627 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc28a2O88627 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc28a2O88627 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.38■□□□□ 0.37
Slc28a2O88627 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Slc28a2O88627 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Slc28a2O88627 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.38■□□□□ 0.37
Slc28a2O88627 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Slc28a2O88627 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc28a2O88627 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc28a2O88627 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc28a2O88627 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Slc28a2O88627 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc28a2O88627 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Slc28a2O88627 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc28a2O88627 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc28a2O88627 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc28a2O88627 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Slc28a2O88627 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Slc28a2O88627 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.37■□□□□ 0.37
Slc28a2O88627 Gm45102-201ENSMUST00000207427 857 ntBASIC17.37■□□□□ 0.37
Slc28a2O88627 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc28a2O88627 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.37■□□□□ 0.37
Slc28a2O88627 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc28a2O88627 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc28a2O88627 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc28a2O88627 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc28a2O88627 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Slc28a2O88627 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc28a2O88627 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Slc28a2O88627 Gm14117-201ENSMUST00000122417 843 ntBASIC17.36■□□□□ 0.37
Slc28a2O88627 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Slc28a2O88627 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc28a2O88627 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Slc28a2O88627 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc28a2O88627 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc28a2O88627 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Slc28a2O88627 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.35■□□□□ 0.37
Slc28a2O88627 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc28a2O88627 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc28a2O88627 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc28a2O88627 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc28a2O88627 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Slc28a2O88627 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc28a2O88627 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Slc28a2O88627 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc28a2O88627 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slc28a2O88627 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc28a2O88627 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc28a2O88627 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slc28a2O88627 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.34■□□□□ 0.37
Slc28a2O88627 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slc28a2O88627 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Slc28a2O88627 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc28a2O88627 Gm9870-201ENSMUST00000063874 645 ntBASIC17.34■□□□□ 0.37
Slc28a2O88627 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc28a2O88627 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.33■□□□□ 0.37
Slc28a2O88627 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc28a2O88627 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc28a2O88627 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
Slc28a2O88627 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.33■□□□□ 0.36
Slc28a2O88627 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc28a2O88627 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Slc28a2O88627 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc28a2O88627 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc28a2O88627 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc28a2O88627 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc28a2O88627 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc28a2O88627 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.32■□□□□ 0.36
Slc28a2O88627 Gm22238-201ENSMUST00000175222 88 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms