Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.77■□□□□ 0.59
Abca4O35600 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Abca4O35600 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Abca4O35600 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Abca4O35600 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abca4O35600 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abca4O35600 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abca4O35600 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.76■□□□□ 0.59
Abca4O35600 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.76■□□□□ 0.59
Abca4O35600 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Abca4O35600 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Abca4O35600 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Abca4O35600 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.74■□□□□ 0.59
Abca4O35600 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Abca4O35600 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.74■□□□□ 0.59
Abca4O35600 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Abca4O35600 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abca4O35600 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abca4O35600 Mir5122-201ENSMUST00000175004 89 ntBASIC18.74■□□□□ 0.59
Abca4O35600 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Abca4O35600 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Abca4O35600 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Abca4O35600 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Abca4O35600 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abca4O35600 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Abca4O35600 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.73■□□□□ 0.59
Abca4O35600 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Abca4O35600 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Abca4O35600 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Abca4O35600 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.73■□□□□ 0.59
Abca4O35600 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abca4O35600 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Abca4O35600 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abca4O35600 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abca4O35600 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abca4O35600 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abca4O35600 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Abca4O35600 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Abca4O35600 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Abca4O35600 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Abca4O35600 Gm12896-201ENSMUST00000118430 226 ntBASIC18.72■□□□□ 0.59
Abca4O35600 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Abca4O35600 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.72■□□□□ 0.59
Abca4O35600 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.72■□□□□ 0.59
Abca4O35600 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Abca4O35600 Gm10698-201ENSMUST00000182663 604 ntBASIC18.72■□□□□ 0.59
Abca4O35600 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Abca4O35600 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Abca4O35600 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Abca4O35600 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Abca4O35600 Gm25925-201ENSMUST00000158314 306 ntBASIC18.71■□□□□ 0.59
Abca4O35600 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abca4O35600 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Abca4O35600 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abca4O35600 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Abca4O35600 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Abca4O35600 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.71■□□□□ 0.58
Abca4O35600 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abca4O35600 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Abca4O35600 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Abca4O35600 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abca4O35600 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Abca4O35600 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Abca4O35600 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Abca4O35600 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.7■□□□□ 0.58
Abca4O35600 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Abca4O35600 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.7■□□□□ 0.58
Abca4O35600 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Abca4O35600 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.69■□□□□ 0.58
Abca4O35600 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abca4O35600 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abca4O35600 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abca4O35600 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abca4O35600 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abca4O35600 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.69■□□□□ 0.58
Abca4O35600 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abca4O35600 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Abca4O35600 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Abca4O35600 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Abca4O35600 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.68■□□□□ 0.58
Abca4O35600 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abca4O35600 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Abca4O35600 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abca4O35600 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.68■□□□□ 0.58
Abca4O35600 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abca4O35600 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.68■□□□□ 0.58
Abca4O35600 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Abca4O35600 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Abca4O35600 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.68■□□□□ 0.58
Abca4O35600 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Abca4O35600 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Abca4O35600 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abca4O35600 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.67■□□□□ 0.58
Abca4O35600 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abca4O35600 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Abca4O35600 Gm15378-201ENSMUST00000121894 207 ntBASIC18.67■□□□□ 0.58
Abca4O35600 Gm2559-201ENSMUST00000201323 363 ntBASIC18.67■□□□□ 0.58
Abca4O35600 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Abca4O35600 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Abca4O35600 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms