Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chrna9G3X8Z7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.2■□□□□ 0.98
Chrna9G3X8Z7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chrna9G3X8Z7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.2■□□□□ 0.98
Chrna9G3X8Z7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chrna9G3X8Z7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Chrna9G3X8Z7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chrna9G3X8Z7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.2■□□□□ 0.98
Chrna9G3X8Z7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.19■□□□□ 0.98
Chrna9G3X8Z7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Chrna9G3X8Z7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chrna9G3X8Z7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chrna9G3X8Z7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chrna9G3X8Z7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chrna9G3X8Z7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chrna9G3X8Z7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.18■□□□□ 0.98
Chrna9G3X8Z7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna9G3X8Z7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna9G3X8Z7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna9G3X8Z7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna9G3X8Z7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Chrna9G3X8Z7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chrna9G3X8Z7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chrna9G3X8Z7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chrna9G3X8Z7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chrna9G3X8Z7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Chrna9G3X8Z7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.17■□□□□ 0.98
Chrna9G3X8Z7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Chrna9G3X8Z7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chrna9G3X8Z7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Chrna9G3X8Z7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chrna9G3X8Z7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chrna9G3X8Z7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Chrna9G3X8Z7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chrna9G3X8Z7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
Chrna9G3X8Z7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chrna9G3X8Z7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
Chrna9G3X8Z7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chrna9G3X8Z7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chrna9G3X8Z7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
Chrna9G3X8Z7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Chrna9G3X8Z7 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.15■□□□□ 0.98
Chrna9G3X8Z7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna9G3X8Z7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna9G3X8Z7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna9G3X8Z7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna9G3X8Z7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Chrna9G3X8Z7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna9G3X8Z7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna9G3X8Z7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna9G3X8Z7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Chrna9G3X8Z7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Chrna9G3X8Z7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
Chrna9G3X8Z7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Chrna9G3X8Z7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Chrna9G3X8Z7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Chrna9G3X8Z7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Chrna9G3X8Z7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chrna9G3X8Z7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chrna9G3X8Z7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chrna9G3X8Z7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Chrna9G3X8Z7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Chrna9G3X8Z7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Chrna9G3X8Z7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chrna9G3X8Z7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.13■□□□□ 0.97
Chrna9G3X8Z7 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.13■□□□□ 0.97
Chrna9G3X8Z7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Chrna9G3X8Z7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chrna9G3X8Z7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Chrna9G3X8Z7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chrna9G3X8Z7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Chrna9G3X8Z7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chrna9G3X8Z7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chrna9G3X8Z7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Chrna9G3X8Z7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chrna9G3X8Z7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chrna9G3X8Z7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chrna9G3X8Z7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Chrna9G3X8Z7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chrna9G3X8Z7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chrna9G3X8Z7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chrna9G3X8Z7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chrna9G3X8Z7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chrna9G3X8Z7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Chrna9G3X8Z7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Chrna9G3X8Z7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Chrna9G3X8Z7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Chrna9G3X8Z7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.11■□□□□ 0.97
Chrna9G3X8Z7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chrna9G3X8Z7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chrna9G3X8Z7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.1■□□□□ 0.97
Chrna9G3X8Z7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Chrna9G3X8Z7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chrna9G3X8Z7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chrna9G3X8Z7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Chrna9G3X8Z7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Chrna9G3X8Z7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.1■□□□□ 0.97
Chrna9G3X8Z7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.1■□□□□ 0.97
Chrna9G3X8Z7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chrna9G3X8Z7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms