Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cdr1E9Q0B4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdr1E9Q0B4 Gm16437-201ENSMUST00000025669 507 ntBASIC19.36■□□□□ 0.69
Cdr1E9Q0B4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdr1E9Q0B4 Gm9806-201ENSMUST00000051080 552 ntBASIC19.36■□□□□ 0.69
Cdr1E9Q0B4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cdr1E9Q0B4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cdr1E9Q0B4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cdr1E9Q0B4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdr1E9Q0B4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdr1E9Q0B4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdr1E9Q0B4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdr1E9Q0B4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdr1E9Q0B4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdr1E9Q0B4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.35■□□□□ 0.69
Cdr1E9Q0B4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdr1E9Q0B4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdr1E9Q0B4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdr1E9Q0B4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdr1E9Q0B4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdr1E9Q0B4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Cdr1E9Q0B4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cdr1E9Q0B4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdr1E9Q0B4 Scarna2-201ENSMUST00000157560 414 ntBASIC19.34■□□□□ 0.69
Cdr1E9Q0B4 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.34■□□□□ 0.69
Cdr1E9Q0B4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdr1E9Q0B4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Cdr1E9Q0B4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cdr1E9Q0B4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdr1E9Q0B4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
Cdr1E9Q0B4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cdr1E9Q0B4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.33■□□□□ 0.68
Cdr1E9Q0B4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdr1E9Q0B4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdr1E9Q0B4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdr1E9Q0B4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cdr1E9Q0B4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdr1E9Q0B4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdr1E9Q0B4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Cdr1E9Q0B4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
Cdr1E9Q0B4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdr1E9Q0B4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdr1E9Q0B4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cdr1E9Q0B4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Cdr1E9Q0B4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdr1E9Q0B4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdr1E9Q0B4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.32■□□□□ 0.68
Cdr1E9Q0B4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.31■□□□□ 0.68
Cdr1E9Q0B4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdr1E9Q0B4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdr1E9Q0B4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdr1E9Q0B4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Cdr1E9Q0B4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdr1E9Q0B4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdr1E9Q0B4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdr1E9Q0B4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdr1E9Q0B4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cdr1E9Q0B4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.3■□□□□ 0.68
Cdr1E9Q0B4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.3■□□□□ 0.68
Cdr1E9Q0B4 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.3■□□□□ 0.68
Cdr1E9Q0B4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdr1E9Q0B4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdr1E9Q0B4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdr1E9Q0B4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdr1E9Q0B4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdr1E9Q0B4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdr1E9Q0B4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cdr1E9Q0B4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdr1E9Q0B4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdr1E9Q0B4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdr1E9Q0B4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdr1E9Q0B4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdr1E9Q0B4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdr1E9Q0B4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdr1E9Q0B4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdr1E9Q0B4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cdr1E9Q0B4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdr1E9Q0B4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdr1E9Q0B4 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.28■□□□□ 0.68
Cdr1E9Q0B4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.28■□□□□ 0.68
Cdr1E9Q0B4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdr1E9Q0B4 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.28■□□□□ 0.68
Cdr1E9Q0B4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdr1E9Q0B4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Cdr1E9Q0B4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cdr1E9Q0B4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Cdr1E9Q0B4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdr1E9Q0B4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Cdr1E9Q0B4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cdr1E9Q0B4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdr1E9Q0B4 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.27■□□□□ 0.68
Cdr1E9Q0B4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdr1E9Q0B4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Cdr1E9Q0B4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdr1E9Q0B4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdr1E9Q0B4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdr1E9Q0B4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdr1E9Q0B4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Cdr1E9Q0B4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cdr1E9Q0B4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms