Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm28043E0CXC2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm28043E0CXC2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm28043E0CXC2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
Gm28043E0CXC2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gm28043E0CXC2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Gm28043E0CXC2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gm28043E0CXC2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gm28043E0CXC2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.58■□□□□ 0.72
Gm28043E0CXC2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.58■□□□□ 0.72
Gm28043E0CXC2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm28043E0CXC2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm28043E0CXC2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.58■□□□□ 0.72
Gm28043E0CXC2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm28043E0CXC2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Gm28043E0CXC2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm28043E0CXC2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.57■□□□□ 0.72
Gm28043E0CXC2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gm28043E0CXC2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
Gm28043E0CXC2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Gm28043E0CXC2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Gm28043E0CXC2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Gm28043E0CXC2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm28043E0CXC2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.57■□□□□ 0.72
Gm28043E0CXC2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gm28043E0CXC2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm28043E0CXC2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm28043E0CXC2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gm28043E0CXC2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm28043E0CXC2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gm28043E0CXC2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Gm28043E0CXC2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.56■□□□□ 0.72
Gm28043E0CXC2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm28043E0CXC2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm28043E0CXC2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Gm28043E0CXC2 Gm9870-201ENSMUST00000063874 645 ntBASIC19.56■□□□□ 0.72
Gm28043E0CXC2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm28043E0CXC2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm28043E0CXC2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gm28043E0CXC2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm28043E0CXC2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm28043E0CXC2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm28043E0CXC2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gm28043E0CXC2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm28043E0CXC2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Gm28043E0CXC2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.55■□□□□ 0.72
Gm28043E0CXC2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm28043E0CXC2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gm28043E0CXC2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm28043E0CXC2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm28043E0CXC2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm28043E0CXC2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm28043E0CXC2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Gm28043E0CXC2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm28043E0CXC2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.54■□□□□ 0.72
Gm28043E0CXC2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.54■□□□□ 0.72
Gm28043E0CXC2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm28043E0CXC2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm28043E0CXC2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm28043E0CXC2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm28043E0CXC2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.54■□□□□ 0.72
Gm28043E0CXC2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gm28043E0CXC2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Gm28043E0CXC2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gm28043E0CXC2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Gm28043E0CXC2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.53■□□□□ 0.72
Gm28043E0CXC2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm28043E0CXC2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm28043E0CXC2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm28043E0CXC2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm28043E0CXC2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Gm28043E0CXC2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm28043E0CXC2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.52■□□□□ 0.72
Gm28043E0CXC2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm28043E0CXC2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Gm28043E0CXC2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Gm28043E0CXC2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.52■□□□□ 0.72
Gm28043E0CXC2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gm28043E0CXC2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gm28043E0CXC2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Gm28043E0CXC2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Gm28043E0CXC2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm28043E0CXC2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gm28043E0CXC2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.52■□□□□ 0.71
Gm28043E0CXC2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm28043E0CXC2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Gm28043E0CXC2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm28043E0CXC2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Gm28043E0CXC2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Gm28043E0CXC2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.51■□□□□ 0.71
Gm28043E0CXC2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm28043E0CXC2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.51■□□□□ 0.71
Gm28043E0CXC2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm28043E0CXC2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Gm28043E0CXC2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm28043E0CXC2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm28043E0CXC2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gm28043E0CXC2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Gm28043E0CXC2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.5■□□□□ 0.71
Gm28043E0CXC2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms