Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Gm3880A0A1B0GSB3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Gm3880A0A1B0GSB3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm3880A0A1B0GSB3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm3880A0A1B0GSB3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm3880A0A1B0GSB3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm3880A0A1B0GSB3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm3880A0A1B0GSB3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm3880A0A1B0GSB3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Gm3880A0A1B0GSB3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Gm3880A0A1B0GSB3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm3880A0A1B0GSB3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm3880A0A1B0GSB3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Gm3880A0A1B0GSB3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm3880A0A1B0GSB3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC9.83□□□□□ -0.84
Gm3880A0A1B0GSB3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC9.83□□□□□ -0.84
Gm3880A0A1B0GSB3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm3880A0A1B0GSB3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm3880A0A1B0GSB3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Gm3880A0A1B0GSB3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Gm3880A0A1B0GSB3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Gm5784-201ENSMUST00000179344 2478 ntBASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Gm3880A0A1B0GSB3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm3880A0A1B0GSB3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm3880A0A1B0GSB3 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm3880A0A1B0GSB3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm3880A0A1B0GSB3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC9.81□□□□□ -0.84
Gm3880A0A1B0GSB3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm3880A0A1B0GSB3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Gm3880A0A1B0GSB3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Gm3880A0A1B0GSB3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Gm3880A0A1B0GSB3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm3880A0A1B0GSB3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Gm3880A0A1B0GSB3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Gm3880A0A1B0GSB3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm3880A0A1B0GSB3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm3880A0A1B0GSB3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm3880A0A1B0GSB3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Gm3880A0A1B0GSB3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm3880A0A1B0GSB3 Gm19439-201ENSMUST00000198195 2273 ntBASIC9.81□□□□□ -0.84
Gm3880A0A1B0GSB3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm3880A0A1B0GSB3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Gm3880A0A1B0GSB3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm3880A0A1B0GSB3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Gm3880A0A1B0GSB3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Gm14121-201ENSMUST00000121441 1380 ntBASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Gm3880A0A1B0GSB3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms