Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv29A0A0G2LB96 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv29A0A0G2LB96 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trbv29A0A0G2LB96 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv29A0A0G2LB96 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trbv29A0A0G2LB96 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.28■□□□□ 0.2
Trbv29A0A0G2LB96 Gm9870-201ENSMUST00000063874 645 ntBASIC16.28■□□□□ 0.2
Trbv29A0A0G2LB96 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv29A0A0G2LB96 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv29A0A0G2LB96 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv29A0A0G2LB96 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv29A0A0G2LB96 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv29A0A0G2LB96 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv29A0A0G2LB96 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv29A0A0G2LB96 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv29A0A0G2LB96 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.27■□□□□ 0.2
Trbv29A0A0G2LB96 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv29A0A0G2LB96 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv29A0A0G2LB96 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv29A0A0G2LB96 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Trbv29A0A0G2LB96 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.26■□□□□ 0.19
Trbv29A0A0G2LB96 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv29A0A0G2LB96 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trbv29A0A0G2LB96 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv29A0A0G2LB96 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv29A0A0G2LB96 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv29A0A0G2LB96 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv29A0A0G2LB96 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv29A0A0G2LB96 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv29A0A0G2LB96 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv29A0A0G2LB96 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.25■□□□□ 0.19
Trbv29A0A0G2LB96 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.25■□□□□ 0.19
Trbv29A0A0G2LB96 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.25■□□□□ 0.19
Trbv29A0A0G2LB96 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv29A0A0G2LB96 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv29A0A0G2LB96 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trbv29A0A0G2LB96 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv29A0A0G2LB96 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
Trbv29A0A0G2LB96 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trbv29A0A0G2LB96 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv29A0A0G2LB96 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Trbv29A0A0G2LB96 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv29A0A0G2LB96 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.24■□□□□ 0.19
Trbv29A0A0G2LB96 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv29A0A0G2LB96 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trbv29A0A0G2LB96 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv29A0A0G2LB96 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv29A0A0G2LB96 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv29A0A0G2LB96 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv29A0A0G2LB96 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv29A0A0G2LB96 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv29A0A0G2LB96 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv29A0A0G2LB96 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.23■□□□□ 0.19
Trbv29A0A0G2LB96 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.23■□□□□ 0.19
Trbv29A0A0G2LB96 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv29A0A0G2LB96 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv29A0A0G2LB96 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv29A0A0G2LB96 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Trbv29A0A0G2LB96 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv29A0A0G2LB96 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv29A0A0G2LB96 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trbv29A0A0G2LB96 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv29A0A0G2LB96 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.21■□□□□ 0.19
Trbv29A0A0G2LB96 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.21■□□□□ 0.19
Trbv29A0A0G2LB96 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.21■□□□□ 0.19
Trbv29A0A0G2LB96 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trbv29A0A0G2LB96 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trbv29A0A0G2LB96 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trbv29A0A0G2LB96 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trbv29A0A0G2LB96 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.2■□□□□ 0.18
Trbv29A0A0G2LB96 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv29A0A0G2LB96 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv29A0A0G2LB96 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv29A0A0G2LB96 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.2■□□□□ 0.18
Trbv29A0A0G2LB96 Etf1-202ENSMUST00000180351 108 ntBASIC16.2■□□□□ 0.18
Trbv29A0A0G2LB96 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms