Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9959-201ENSMUST00000068277 390 ntBASIC17.23■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.22■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.21■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trav15d-2-dv6d-2A0A0G2JGQ7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.2■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.2■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.19■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.19■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.19■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.18■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.18■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.18■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.17■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 AA386476-201ENSMUST00000098781 1665 ntBASIC17.16■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.16■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.15■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trav15d-2-dv6d-2A0A0G2JGQ7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.14■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms