Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv8-27A0A0G2JF28 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv8-27A0A0G2JF28 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv8-27A0A0G2JF28 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv8-27A0A0G2JF28 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv8-27A0A0G2JF28 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv8-27A0A0G2JF28 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv8-27A0A0G2JF28 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Igkv8-27A0A0G2JF28 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Igkv8-27A0A0G2JF28 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Igkv8-27A0A0G2JF28 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Igkv8-27A0A0G2JF28 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-27A0A0G2JF28 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-27A0A0G2JF28 Gm6627-201ENSMUST00000218299 2386 ntBASIC12.33□□□□□ -0.44
Igkv8-27A0A0G2JF28 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-27A0A0G2JF28 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC12.33□□□□□ -0.44
Igkv8-27A0A0G2JF28 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC12.33□□□□□ -0.44
Igkv8-27A0A0G2JF28 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-27A0A0G2JF28 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-27A0A0G2JF28 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-27A0A0G2JF28 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-27A0A0G2JF28 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-27A0A0G2JF28 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-27A0A0G2JF28 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-27A0A0G2JF28 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-27A0A0G2JF28 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-27A0A0G2JF28 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Igkv8-27A0A0G2JF28 Gm5953-201ENSMUST00000220644 2616 ntBASIC12.33□□□□□ -0.44
Igkv8-27A0A0G2JF28 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-27A0A0G2JF28 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-27A0A0G2JF28 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-27A0A0G2JF28 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-27A0A0G2JF28 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Igkv8-27A0A0G2JF28 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Igkv8-27A0A0G2JF28 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-27A0A0G2JF28 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-27A0A0G2JF28 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-27A0A0G2JF28 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-27A0A0G2JF28 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Igkv8-27A0A0G2JF28 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.32□□□□□ -0.44
Igkv8-27A0A0G2JF28 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-27A0A0G2JF28 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-27A0A0G2JF28 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-27A0A0G2JF28 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-27A0A0G2JF28 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-27A0A0G2JF28 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-27A0A0G2JF28 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Igkv8-27A0A0G2JF28 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-27A0A0G2JF28 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-27A0A0G2JF28 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC12.32□□□□□ -0.44
Igkv8-27A0A0G2JF28 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-27A0A0G2JF28 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-27A0A0G2JF28 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.31□□□□□ -0.44
Igkv8-27A0A0G2JF28 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC12.31□□□□□ -0.44
Igkv8-27A0A0G2JF28 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-27A0A0G2JF28 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-27A0A0G2JF28 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC12.31□□□□□ -0.44
Igkv8-27A0A0G2JF28 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-27A0A0G2JF28 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Igkv8-27A0A0G2JF28 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-27A0A0G2JF28 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-27A0A0G2JF28 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-27A0A0G2JF28 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-27A0A0G2JF28 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC12.31□□□□□ -0.44
Igkv8-27A0A0G2JF28 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC12.31□□□□□ -0.44
Igkv8-27A0A0G2JF28 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-27A0A0G2JF28 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-27A0A0G2JF28 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Igkv8-27A0A0G2JF28 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-27A0A0G2JF28 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-27A0A0G2JF28 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-27A0A0G2JF28 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Igkv8-27A0A0G2JF28 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-27A0A0G2JF28 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-27A0A0G2JF28 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-27A0A0G2JF28 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-27A0A0G2JF28 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-27A0A0G2JF28 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-27A0A0G2JF28 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-27A0A0G2JF28 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-27A0A0G2JF28 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC12.3□□□□□ -0.44
Igkv8-27A0A0G2JF28 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-27A0A0G2JF28 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC12.3□□□□□ -0.44
Igkv8-27A0A0G2JF28 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-27A0A0G2JF28 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Igkv8-27A0A0G2JF28 Gm6802-201ENSMUST00000167843 1983 ntBASIC12.3□□□□□ -0.44
Igkv8-27A0A0G2JF28 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-27A0A0G2JF28 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Igkv8-27A0A0G2JF28 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-27A0A0G2JF28 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-27A0A0G2JF28 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-27A0A0G2JF28 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-27A0A0G2JF28 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-27A0A0G2JF28 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-27A0A0G2JF28 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-27A0A0G2JF28 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-27A0A0G2JF28 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Igkv8-27A0A0G2JF28 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Igkv8-27A0A0G2JF28 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-27A0A0G2JF28 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms