Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7-1A0A0G2JEV5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav7-1A0A0G2JEV5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Trav7-1A0A0G2JEV5 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7-1A0A0G2JEV5 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7-1A0A0G2JEV5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7-1A0A0G2JEV5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7-1A0A0G2JEV5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7-1A0A0G2JEV5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav7-1A0A0G2JEV5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav7-1A0A0G2JEV5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7-1A0A0G2JEV5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7-1A0A0G2JEV5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Trav7-1A0A0G2JEV5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7-1A0A0G2JEV5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7-1A0A0G2JEV5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav7-1A0A0G2JEV5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.08■□□□□ 0
Trav7-1A0A0G2JEV5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7-1A0A0G2JEV5 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7-1A0A0G2JEV5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav7-1A0A0G2JEV5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav7-1A0A0G2JEV5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav7-1A0A0G2JEV5 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav7-1A0A0G2JEV5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7-1A0A0G2JEV5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Trav7-1A0A0G2JEV5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav7-1A0A0G2JEV5 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7-1A0A0G2JEV5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav7-1A0A0G2JEV5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.07■□□□□ 0
Trav7-1A0A0G2JEV5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.07■□□□□ 0
Trav7-1A0A0G2JEV5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7-1A0A0G2JEV5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7-1A0A0G2JEV5 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7-1A0A0G2JEV5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.07■□□□□ 0
Trav7-1A0A0G2JEV5 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Trav7-1A0A0G2JEV5 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7-1A0A0G2JEV5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7-1A0A0G2JEV5 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7-1A0A0G2JEV5 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav7-1A0A0G2JEV5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7-1A0A0G2JEV5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav7-1A0A0G2JEV5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7-1A0A0G2JEV5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav7-1A0A0G2JEV5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7-1A0A0G2JEV5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav7-1A0A0G2JEV5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7-1A0A0G2JEV5 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7-1A0A0G2JEV5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7-1A0A0G2JEV5 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7-1A0A0G2JEV5 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.06■□□□□ 0
Trav7-1A0A0G2JEV5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7-1A0A0G2JEV5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.06■□□□□ 0
Trav7-1A0A0G2JEV5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7-1A0A0G2JEV5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav7-1A0A0G2JEV5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav7-1A0A0G2JEV5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Trav7-1A0A0G2JEV5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Trav7-1A0A0G2JEV5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav7-1A0A0G2JEV5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav7-1A0A0G2JEV5 Gm43530-201ENSMUST00000195920 274 ntBASIC15.05■□□□□ -0
Trav7-1A0A0G2JEV5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.05■□□□□ -0
Trav7-1A0A0G2JEV5 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7-1A0A0G2JEV5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7-1A0A0G2JEV5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7-1A0A0G2JEV5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trav7-1A0A0G2JEV5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7-1A0A0G2JEV5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav7-1A0A0G2JEV5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav7-1A0A0G2JEV5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7-1A0A0G2JEV5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Trav7-1A0A0G2JEV5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7-1A0A0G2JEV5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7-1A0A0G2JEV5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.04■□□□□ -0
Trav7-1A0A0G2JEV5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7-1A0A0G2JEV5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7-1A0A0G2JEV5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7-1A0A0G2JEV5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7-1A0A0G2JEV5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav7-1A0A0G2JEV5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7-1A0A0G2JEV5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav7-1A0A0G2JEV5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.03■□□□□ -0
Trav7-1A0A0G2JEV5 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.03■□□□□ -0
Trav7-1A0A0G2JEV5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav7-1A0A0G2JEV5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav7-1A0A0G2JEV5 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7-1A0A0G2JEV5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7-1A0A0G2JEV5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.03■□□□□ -0
Trav7-1A0A0G2JEV5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7-1A0A0G2JEV5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7-1A0A0G2JEV5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7-1A0A0G2JEV5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav7-1A0A0G2JEV5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav7-1A0A0G2JEV5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav7-1A0A0G2JEV5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav7-1A0A0G2JEV5 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav7-1A0A0G2JEV5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.02■□□□□ -0
Trav7-1A0A0G2JEV5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.02■□□□□ -0
Trav7-1A0A0G2JEV5 Gm9870-201ENSMUST00000063874 645 ntBASIC15.02■□□□□ -0
Trav7-1A0A0G2JEV5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav7-1A0A0G2JEV5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms