Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-28A0A0G2JE47 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-28A0A0G2JE47 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-28A0A0G2JE47 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-28A0A0G2JE47 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-28A0A0G2JE47 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Igkv8-28A0A0G2JE47 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-28A0A0G2JE47 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-28A0A0G2JE47 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-28A0A0G2JE47 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-28A0A0G2JE47 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Igkv8-28A0A0G2JE47 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Igkv8-28A0A0G2JE47 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC12.3□□□□□ -0.44
Igkv8-28A0A0G2JE47 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-28A0A0G2JE47 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Igkv8-28A0A0G2JE47 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-28A0A0G2JE47 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-28A0A0G2JE47 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-28A0A0G2JE47 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Igkv8-28A0A0G2JE47 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-28A0A0G2JE47 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-28A0A0G2JE47 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-28A0A0G2JE47 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-28A0A0G2JE47 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-28A0A0G2JE47 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-28A0A0G2JE47 Gm43909-201ENSMUST00000203443 1876 ntBASIC12.29□□□□□ -0.44
Igkv8-28A0A0G2JE47 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Igkv8-28A0A0G2JE47 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-28A0A0G2JE47 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-28A0A0G2JE47 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv8-28A0A0G2JE47 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv8-28A0A0G2JE47 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC12.28□□□□□ -0.44
Igkv8-28A0A0G2JE47 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC12.28□□□□□ -0.44
Igkv8-28A0A0G2JE47 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv8-28A0A0G2JE47 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv8-28A0A0G2JE47 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Igkv8-28A0A0G2JE47 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv8-28A0A0G2JE47 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv8-28A0A0G2JE47 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv8-28A0A0G2JE47 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv8-28A0A0G2JE47 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv8-28A0A0G2JE47 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv8-28A0A0G2JE47 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Igkv8-28A0A0G2JE47 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Igkv8-28A0A0G2JE47 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Igkv8-28A0A0G2JE47 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Igkv8-28A0A0G2JE47 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Igkv8-28A0A0G2JE47 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Igkv8-28A0A0G2JE47 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv8-28A0A0G2JE47 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv8-28A0A0G2JE47 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv8-28A0A0G2JE47 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv8-28A0A0G2JE47 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv8-28A0A0G2JE47 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv8-28A0A0G2JE47 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC12.27□□□□□ -0.45
Igkv8-28A0A0G2JE47 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv8-28A0A0G2JE47 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv8-28A0A0G2JE47 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv8-28A0A0G2JE47 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Igkv8-28A0A0G2JE47 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Igkv8-28A0A0G2JE47 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Igkv8-28A0A0G2JE47 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Igkv8-28A0A0G2JE47 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Igkv8-28A0A0G2JE47 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 Gm38342-201ENSMUST00000195710 2980 ntBASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC12.26□□□□□ -0.45
Igkv8-28A0A0G2JE47 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv8-28A0A0G2JE47 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv8-28A0A0G2JE47 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv8-28A0A0G2JE47 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv8-28A0A0G2JE47 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv8-28A0A0G2JE47 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv8-28A0A0G2JE47 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv8-28A0A0G2JE47 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv8-28A0A0G2JE47 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv8-28A0A0G2JE47 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv8-28A0A0G2JE47 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Igkv8-28A0A0G2JE47 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv8-28A0A0G2JE47 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Igkv8-28A0A0G2JE47 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms